Factsheet for TraesCS2B01G112400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G096200.1	Wheat	cytosol	95.74	95.74
TraesCS2A01G097100.1	Wheat	cytosol	94.5	94.67
HORVU2Hr1G016300.1	Barley	cytosol	76.24	94.3
Os07t0688300-01	Rice	cytosol	64.72	79.0
KXG36990	Sorghum	cytosol	73.05	73.18
Zm00001d022536_P008	Maize	cytosol	72.52	72.01
VIT_14s0060g00930.t01	Wine grape	cytosol	45.39	47.85
TraesCS1B01G126500.1	Wheat	cytosol	45.04	47.57
AT1G09270.1	Thale cress	cytosol	45.04	47.21
PGSC0003DMT400007130	Potato	cytosol	44.68	47.19
Solyc01g100720.2.1	Tomato	nucleus	44.33	46.82
Bra018570.1-P	Field mustard	cytosol	44.68	46.49
CDY31102	Canola	plasma membrane	44.68	46.49
CDX94988	Canola	cytosol	44.5	46.48
CDY32165	Canola	cytosol	44.5	46.31
CDX93514	Canola	cytosol	44.5	46.31
TraesCS3B01G202800.2	Wheat	cytosol	43.62	45.81
KRG99893	Soybean	cytosol	31.03	39.95
KRG99898	Soybean	cytosol	31.03	39.68
KRG96699	Soybean	cytosol	33.33	38.84
KRG99853	Soybean	cytosol, plastid	33.33	38.45
KRG99895	Soybean	cytosol, plastid	33.33	38.45
KRH68429	Soybean	cytosol, plastid	35.28	38.12
GSMUA_Achr5P27180_001	Banana	cytosol	30.67	37.37
KRG99088	Soybean	cytosol	28.01	35.51
KRG96700	Soybean	cytosol	30.14	33.53
Bra030765.1-P	Field mustard	cytosol	44.68	33.42
TraesCS3B01G152900.1	Wheat	plastid	22.52	24.24

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150
GO:GO:0061608	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:Importin-a_IBB	InterPro:Importing_su_alpha
PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214
PANTHER:PTHR23316	PANTHER:PTHR23316:SF17	SMART:SM00185	SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS2B01G112400	EnsemblPlants:TraesCS2B01G112400.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:75691893..75695305

Molecular Weight (calculated)

61511.4 Da

IEP (calculated)

4.543

GRAVY (calculated)

-0.165

Length

564 amino acids

Sequence
(BLAST)

001: MPRVPRRPSD EARRGAYKPP GVDAARSRRR REDRLLALRR RNRDAGLFKR RREEPSLTPA PVVSPSDAAA DATAPPPSSE PSSPPSSPPP ADALRAAADA
101: ELEGLSEMVD KVWSDDAATQ LEATVQFRKL LSDGKNSTMI KIIRADVLPR FAEFLSRQRP PQLQMEAAWV LTNIAASDYT LLVAECGAVP RLIELLESPD
201: ANIRHQATWA LGNIAADMPS CREIVLDHGA VTPLLAQFKE DMKVSVLRTA TWALSNLCFG KLPAEVQVKP ILEIVSLLIH SADEKILADA CWALYYICDG
301: VEGGIQDALD AGVCPQLVKL LMHASANILL PVIMSLARIS AGDDTQVQVI VEQGILPCLA QLLARNYPKI IKKQACLIVS NITAGSKDQI QAVIDADVMN
401: HVIVLLKTSE TDLKKEAAWA ISNAASGGSS DQIQYLVSRG CLEPLCNVLK YQDVDLVYTC LEGLQNILEE GDIGKQRNES AMNPYAQFIL ENGGLDNLED
501: LQDFDNDAVY KLAMKLLERY WDEEVSDDAN LTASKDHPAE NVETVQPEDT AQPPVAASSV DGTE

Best Arabidopsis Sequence Match ( AT1G09270.1 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.