Factsheet for TraesCS2A01G097100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G096200.1	Wheat	cytosol	95.56	95.39
TraesCS2B01G112400.2	Wheat	cytosol	94.67	94.5
HORVU2Hr1G016300.1	Barley	cytosol	75.67	93.42
Os07t0688300-01	Rice	cytosol	65.9	80.3
KXG36990	Sorghum	cytosol	73.36	73.36
Zm00001d022536_P008	Maize	cytosol	73.36	72.71
TraesCS3A01G172000.1	Wheat	golgi, nucleus	45.29	48.66
VIT_14s0060g00930.t01	Wine grape	cytosol	45.65	48.04
PGSC0003DMT400007130	Potato	cytosol	45.12	47.57
TraesCS1A01G097400.1	Wheat	nucleus	44.94	47.38
AT1G09270.1	Thale cress	cytosol	45.12	47.21
Solyc01g100720.2.1	Tomato	nucleus	44.58	47.0
CDY31102	Canola	plasma membrane	45.12	46.86
Bra018570.1-P	Field mustard	cytosol	44.76	46.49
CDX94988	Canola	cytosol	44.58	46.48
CDY32165	Canola	cytosol	44.58	46.31
CDX93514	Canola	cytosol	44.58	46.31
KRG99893	Soybean	cytosol	30.73	39.5
KRG99898	Soybean	cytosol	30.73	39.23
KRG96699	Soybean	cytosol	33.39	38.84
KRH68429	Soybean	cytosol, plastid	35.7	38.51
KRG99895	Soybean	cytosol, plastid	33.21	38.24
KRG99853	Soybean	cytosol, plastid	33.21	38.24
GSMUA_Achr5P27180_001	Banana	cytosol	30.37	36.93
KRG99088	Soybean	cytosol	27.89	35.28
KRG96700	Soybean	cytosol	30.37	33.73
Bra030765.1-P	Field mustard	cytosol	44.76	33.42
TraesCS3A01G309900.2	Wheat	plastid	23.09	23.13

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150
GO:GO:0061608	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:Importin-a_IBB	InterPro:Importing_su_alpha
PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214
PANTHER:PTHR23316	PANTHER:PTHR23316:SF17	SMART:SM00185	SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS2A01G097100	EnsemblPlants:TraesCS2A01G097100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:50972015..50975389

Molecular Weight (calculated)

61303.3 Da

IEP (calculated)

4.542

GRAVY (calculated)

-0.180

Length

563 amino acids

Sequence
(BLAST)

001: MPRVPRRPSD EARRGAYKPP GVDAARSRRR REDRFLALRR RNRDTGLFKR RREEPSLTPA PVVPPSDAAA DATAPPPPPE PSSPPSSPPP ADALRAAAEA
101: ELEGLSEMVD KVWSDDTATQ LEATVQFRKL LSDGKNSTMI KIIRADVLPR FAEFLSRQRP PQLQMEAAWV LTNIAASDYT LLVAECGAVP RLVELLESPD
201: ANIRHQAIWA LGNIAADMPS CRETVLDHGA VTPLLAQFKE GMKVSVLRTA TWALSNLCFG KLPAEVQVKP ILEIISLLIH SADEKILADA CWALYYICDG
301: VEGGIQDALD AGVCPQLIKL LMHASANILL PVITSLARIS AGDDTQVQVI VEQGILPCLA QLLARNYPKI IKKQACLIVS NITGGSKDQI QAVIDADVMN
401: HVIVLLKTSE TDLKKEAAWA ISNAASGGSS NQIQYLVSRG CLEPLCNVLK YQDVDLVYTC LEGLQNILEE GEIGKQGNES TTNPYAQFIL ENGGLDNLED
501: LQDFDNDAVY KLAMKLLEKY WDEEVSDDAN LTASKDGPAE NVETVPEEAT QPPVPAPSSE GIE

Best Arabidopsis Sequence Match ( AT1G09270.1 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.