Factsheet for Zm00001d022536_P008

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36990	Sorghum	cytosol	90.85	91.65
Os07t0688300-01	Rice	cytosol	63.56	78.14
HORVU2Hr1G016300.1	Barley	cytosol	61.8	76.97
TraesCS2A01G097100.1	Wheat	cytosol	72.71	73.36
TraesCS2D01G096200.1	Wheat	cytosol	72.71	73.23
TraesCS2B01G112400.2	Wheat	cytosol	72.01	72.52
VIT_14s0060g00930.t01	Wine grape	cytosol	45.25	48.04
Zm00001d037606_P001	Maize	cytosol	44.19	47.54
Zm00001d008345_P003	Maize	cytosol	43.66	46.79
Zm00001d040274_P001	Maize	cytosol	43.49	46.69
PGSC0003DMT400007130	Potato	cytosol	43.49	46.25
Solyc01g100720.2.1	Tomato	nucleus	43.49	46.25
AT1G09270.1	Thale cress	cytosol	43.66	46.1
Bra018570.1-P	Field mustard	cytosol	43.13	45.2
CDX93514	Canola	cytosol	42.96	45.02
CDX94988	Canola	cytosol	42.78	45.0
CDY31102	Canola	plasma membrane	42.61	44.65
CDY32165	Canola	cytosol	42.25	44.28
Zm00001d009850_P002	Maize	cytosol	44.01	43.4
KRG99893	Soybean	cytosol	30.63	39.73
KRG99898	Soybean	cytosol	30.81	39.68
KRG96699	Soybean	cytosol	33.8	39.67
KRH68429	Soybean	cytosol, plastid	36.44	39.66
Zm00001d042015_P001	Maize	cytosol	11.27	38.55
KRG99895	Soybean	cytosol, plastid	33.1	38.45
KRG99853	Soybean	cytosol, plastid	33.1	38.45
GSMUA_Achr5P27180_001	Banana	cytosol	30.11	36.93
Zm00001d040153_P004	Maize	cytosol	11.8	36.61
KRG99088	Soybean	cytosol	27.64	35.28
KRG96700	Soybean	cytosol	30.63	34.32
Bra030765.1-P	Field mustard	cytosol	42.78	32.23
Zm00001d024033_P002	Maize	plastid	9.15	23.96
Zm00001d008640_P002	Maize	plastid	22.01	23.76

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.3	UniProt:A0A1D6INX2	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3
InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006606
GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	InterPro:IPR000225
InterPro:IPR002652	InterPro:IPR011989	InterPro:Importin-a_IBB	InterPro:Importing_su_alpha	ProteinID:ONM60960.1	PFAM:PF00514
PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316
PANTHER:PTHR23316:SF17	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0002214D72	EnsemblPlantsGene:Zm00001d022536	EnsemblPlants:Zm00001d022536_P008
EnsemblPlants:Zm00001d022536_T008	SEG:seg	:	:	:	:

Description

Importin subunit alpha-4

Coordinates

chr7:+:179671161..179674969

Molecular Weight (calculated)

61717.6 Da

IEP (calculated)

4.504

GRAVY (calculated)

-0.129

Length

568 amino acids

Sequence
(BLAST)

001: MPRAPRRQSD EARRGAYKPR VDFSRSRRRR EDGLLALRRL NRDTGLFKRR RDEPAPAVPA SDLTPTRAEA APFAGITRPA FTPSSPPDVA APRDAAESEL
101: EGLSELVDKL CSDDTTSQLE ATIQFRKLLS DEKNSTVIKI IRADVLPRFA EFLSRHGLPQ LQMEAAWVLT NIAASDYTLL VAECGAVPRL VELLGSLNAN
201: IRHQAIWCLG NIAADLPSCR GILFDHGALT PLLSQFREGM KIPVLRTAMW ALSNLCFGKL PAEVQVKPIL EIISQLIHSA DEKILADACW TVYYICGDKG
301: DAVQDVLDAG VCPQLVNLLM HASANVLLPV IMALARISAG DDKQVEVLIE NDILNCLGQL VARNYPKNIK KQACLIVSNI AAGSKDQIQA VIDADIITSL
401: IVLLRTSEPD VKKEAAWAIS TAASGGSSDQ IQYLVSRGCL EPLCSVLTHN DPDLVYTCLE GLENILHAGE AGKKGEESGT NPYAEFILEC GGLEKLEDLQ
501: DVDSDRIYEL AMKLLQSYWE EEVSESDDPN IPGSNDSSDT VEATSEDAAA AVQPPPVPPP PSAADEAE

Best Arabidopsis Sequence Match ( AT1G09270.1 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.