Factsheet for Zm00001d009850_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037606_P001	Maize	cytosol	89.93	98.11
EES19061	Sorghum	cytosol	89.76	97.55
Os05t0155601-00	Rice	nucleus	82.64	89.14
TraesCS1D01G106200.1	Wheat	cytosol	81.25	87.64
TraesCS1B01G126500.1	Wheat	cytosol	81.25	87.64
TraesCS1A01G097400.1	Wheat	nucleus	81.25	87.64
HORVU1Hr1G022750.2	Barley	plasma membrane	81.42	83.16
GSMUA_Achr3P24150_001	Banana	cytosol	74.48	80.94
GSMUA_Achr1P14770_001	Banana	cytosol	73.96	80.68
VIT_14s0060g01510.t01	Wine grape	cytosol	73.61	80.46
GSMUA_Achr8P06540_001	Banana	cytosol	74.13	80.41
KRH33847	Soybean	nucleus	73.61	79.7
KRG92948	Soybean	nucleus	73.61	79.7
Zm00001d040274_P001	Maize	cytosol	71.18	77.5
Zm00001d008345_P003	Maize	cytosol	71.18	77.36
KRH68461	Soybean	nucleus	70.83	76.69
KRG96743	Soybean	nucleus	70.83	76.69
Zm00001d040153_P004	Maize	cytosol	24.13	75.96
GSMUA_Achr5P27090_001	Banana	cytosol	71.18	75.23
Zm00001d042015_P001	Maize	cytosol	18.75	65.06
Zm00001d022536_P008	Maize	cytosol	43.4	44.01
Zm00001d024033_P002	Maize	plastid	12.67	33.64
Zm00001d008640_P002	Maize	plastid	24.65	27.0

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	UniProt:A0A1D6FMC0	ProteinID:AQK92821.1	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608
InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf
InterPro:Importing_su_alpha	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176
PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF35	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0008426C28
EnsemblPlantsGene:Zm00001d009850	EnsemblPlants:Zm00001d009850_P002	EnsemblPlants:Zm00001d009850_T002	SEG:seg	:	:

Description

importin1Importin subunit alpha

Coordinates

chr8:-:85065908..85071043

Molecular Weight (calculated)

63767.3 Da

IEP (calculated)

5.262

GRAVY (calculated)

-0.189

Length

576 amino acids

Sequence
(BLAST)

001: MSLRPSEREQ MRKGNYKQTV DAEESRRRRE GQMVDIRKAK REESLQKKRR DGFPASAAGV PPMGHSTALQ QKLDGLPAMV QAVHSNDPSV QLEATTQFRK
101: LLSIERSPPI EEVISTGVVP RFIEFLTRED HPQLQFEAAW ALTNIASGTS ENTKVVVESG AVPIFVKLLN SLSEDAVWAL GNVAGDSPKC RDLVLGHGGL
201: YPLLQQLNEH AKLSMLRNAT WTLSNFCRGK PQPNFDQVKP ALPALQHLIH SQDEEVLTDA CWALSYLSDG TNDKIQAVIE SGVFPRLVEL LMHPSASVLI
301: PALRTVGNIV TGDDMQTQVN SIGKLDLLFN VFIFCTLIII FPHCYHVDIL YSTESKCFCV HHYYFSFLQC VIDNQALPCL LNLLTTNHKK SIKKEACWTI
401: SNITAGNKEQ IQAVINANII APLVQLLQTA EFDIKKEAAW AISNATSGGT HDQIKYLVAQ GCIKPLCDLL VCPDPRIVTV CLEGLENILK VGEAEKNLGA
501: GDVNVYAQMI DDAEGLDKIE NLQSHDNTEI YEKAVKMLES YWLEEEDDAM PSGDNPQNGF NFGNQPSVPS GGFNFG

Best Arabidopsis Sequence Match ( AT1G09270.2 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.