Factsheet for Zm00001d040153_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012740.1-P	Field mustard	cytosol	49.73	57.59
Zm00001d042015_P001	Maize	cytosol	26.23	28.92
Zm00001d024033_P002	Maize	plastid	32.24	27.19
Zm00001d037606_P001	Maize	cytosol	74.32	25.76
Zm00001d009850_P002	Maize	cytosol	75.96	24.13
VIT_05s0077g01430.t01	Wine grape	cytosol	60.11	20.79
KRH02317	Soybean	cytosol	59.02	20.38
AT4G16143.2	Thale cress	cytosol	59.56	20.37
PGSC0003DMT400038784	Potato	cytosol	58.47	20.23
Zm00001d040274_P001	Maize	cytosol	58.47	20.23
Zm00001d008345_P003	Maize	cytosol	58.47	20.19
Solyc01g060470.2.1	Tomato	extracellular	58.47	20.19
KRH11998	Soybean	endoplasmic reticulum	58.47	20.15
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	58.47	20.15
CDY22779	Canola	cytosol	57.92	19.85
CDY52043	Canola	cytosol	57.92	19.85
Bra038043.1-P	Field mustard	cytosol	57.92	19.85
CDX90544	Canola	cytosol	58.47	19.81
CDY09716	Canola	cytosol	57.92	19.81
Bra033534.1-P	Field mustard	cytosol	56.83	19.62
CDY32215	Canola	cytosol	56.83	19.62
CDY34430	Canola	cytosol	56.28	19.43
AT3G06720.2	Thale cress	cytosol	54.1	18.61
AT5G49310.1	Thale cress	cytosol	48.63	17.15
KRH50772	Soybean	cytosol, endoplasmic reticulum	40.44	16.34
Zm00001d022536_P008	Maize	cytosol	36.61	11.8
Zm00001d008640_P002	Maize	plastid	24.04	8.37
CDY32170	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	3.83	3.87
Bra012741.1-P	Field mustard	cytosol	6.56	3.36

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	EntrezGene:100191665	MapMan:23.5.1.3	UniProt:A0A1D6MNF5	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0061608	InterPro:IPR000225
InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf	ProteinID:ONM30651.1
PFAM:PF00514	PFAM:PF01749	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF35
SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0008427E70	EnsemblPlantsGene:Zm00001d040153	EnsemblPlants:Zm00001d040153_P004	EnsemblPlants:Zm00001d040153_T004
SEG:seg	:	:	:	:	:

Description

Importin subunit alpha-2

Coordinates

chr3:+:29316639..29318539

Molecular Weight (calculated)

20418.2 Da

IEP (calculated)

8.234

GRAVY (calculated)

-0.605

Length

183 amino acids

Sequence
(BLAST)

001: MSLRPSEREQ MRKGNYKQTV DAEESRRRRE GQMMDMRKAK REESLQKKRC DGFPASAAGV PPMGHSTALQ QKAVHSNDPS GQLEATTQFR KLLSIVEIGI
101: LFSINFSRSP PIEEVISTGV VSRFIEFLTR EDHPQLQFEA AWALTNIASG TSENTKVVVE SGAVRLCPSL SSYSTPSSED VRE

Best Arabidopsis Sequence Match ( AT1G09270.1 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.