Factsheet for Zm00001d008640_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02429	Sorghum	plastid	93.92	87.43
TraesCS3B01G152900.1	Wheat	plastid	85.93	86.26
HORVU3Hr1G025640.2	Barley	plastid	85.55	85.88
Os01t0158000-01	Rice	cytosol	82.7	82.39
TraesCS3D01G135500.2	Wheat	plastid	86.31	80.78
TraesCS3A01G309900.2	Wheat	plastid	86.12	80.61
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	69.96	70.63
VIT_08s0040g02290.t01	Wine grape	cytosol	67.68	68.86
KRH19830	Soybean	cytosol, plastid	65.97	67.12
CDY55698	Canola	cytosol, plastid	64.83	65.58
AT5G03070.1	Thale cress	cytosol, plastid	64.26	65.13
CDY04878	Canola	plastid	64.07	64.68
PGSC0003DMT400027134	Potato	cytosol	63.12	63.85
KRH32422	Soybean	plastid	24.33	63.68
Bra028852.1-P	Field mustard	cytosol	62.93	62.81
Solyc10g084270.1.1	Tomato	cytosol	61.98	62.69
CDX70330	Canola	cytosol, extracellular	30.42	61.3
CDY10407	Canola	cytosol	57.03	60.73
Bra009550.1-P	Field mustard	plastid	32.89	59.25
Zm00001d008345_P003	Maize	cytosol	29.85	29.62
Zm00001d040274_P001	Maize	cytosol	29.47	29.3
Zm00001d037606_P001	Maize	cytosol	27.57	27.46
Zm00001d009850_P002	Maize	cytosol	27.0	24.65
Zm00001d042015_P001	Maize	cytosol	7.6	24.1
Zm00001d040153_P004	Maize	cytosol	8.37	24.04
Zm00001d022536_P008	Maize	cytosol	23.76	22.01
Zm00001d024033_P002	Maize	plastid	8.75	21.2

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.3	ProteinID:AQK90332.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
EMBL:BT065765	UniProt:C0PBU6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608
InterPro:IPR000225	InterPro:IPR011989	InterPro:Importing_su_alpha	PFAM:PF00514	PIRSF:PIRSF005673	PANTHER:PTHR23316
PANTHER:PTHR23316:SF1	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000194B360	EnsemblPlantsGene:Zm00001d008640	EnsemblPlants:Zm00001d008640_P002
EnsemblPlants:Zm00001d008640_T002	SEG:seg	:	:	:	:

Description

Importin subunit alpha

Coordinates

chr8:+:15537598..15544131

Molecular Weight (calculated)

56546.1 Da

IEP (calculated)

5.553

GRAVY (calculated)

-0.032

Length

526 amino acids

Sequence
(BLAST)

001: MADGSASASP PSVSPHQYHR DAIKSSVRNT AANRRREHAI AIGKERREAL MRAKRVCRAP LSGSDEAAGE EGDMVVDEEK ADLETRTTQA VEELKSALSS
101: QGKGAQNRKT EVLRALRRLL SQSEVPPVDA AIKAGAVPLL VQSLSFGSPD EQLLEAAWCL TNIAAGKPEE TKSLLPALPL LIAHLGENSS TLVAEQCAWA
201: IGNVAGEGAE LRNTLLAQGA LWPLARLMLS NKGSTTRTAA WALSNLIKGP DSKAANELIG IDGILNAIIR NLEKADEELV TEVAWVVVYL SALSEKATSL
301: IVRSSMPQLL IGRLLASENL QLLIPVLRGL GNLVAGDGYM VDSVLIVGNS VTDQALSSLI KCLKSDHRVL KKEASWAMSN IAAGSFEHKK LIFGSEATPL
401: LMHLLRTAQF DIRREAAYTL GNLCVVPAGS GNPPTIIVEH LVAIVDGGAL PGFINLVRSA DIESARLGLQ FLELVMRGYP DSQGPKLVET EDGIEAMERF
501: QFHENEMMRN MANGLVDKYF GEDYGL

Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)

001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE

Arabidopsis Description

IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.