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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04878 Canola plastid 92.49 92.13
CDY55698 Canola cytosol, plastid 92.29 92.12
CDX70330 Canola cytosol, extracellular 44.51 88.51
Bra028852.1-P Field mustard cytosol 88.82 87.48
CDY10407 Canola cytosol 80.73 84.82
Bra009550.1-P Field mustard plastid 47.21 83.9
VIT_08s0040g02290.t01 Wine grape cytosol 76.69 76.98
KRH19830 Soybean cytosol, plastid 73.6 73.89
PGSC0003DMT400027134 Potato cytosol 71.29 71.15
KRH32422 Soybean plastid 27.36 70.65
Solyc10g084270.1.1 Tomato cytosol 70.13 70.0
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, nucleus, plastid 67.24 66.99
Zm00001d008640_P002 Maize plastid 65.13 64.26
TraesCS3B01G152900.1 Wheat plastid 63.01 62.4
HORVU3Hr1G025640.2 Barley plastid 62.43 61.83
Os01t0158000-01 Rice cytosol 62.24 61.17
EES02429 Sorghum plastid 63.97 58.76
TraesCS3D01G135500.2 Wheat plastid 62.81 58.01
TraesCS3A01G309900.2 Wheat plastid 62.62 57.83
AT1G02690.2 Thale cress cytosol 29.67 28.57
AT4G16143.2 Thale cress cytosol 28.9 28.04
AT3G06720.2 Thale cress cytosol 28.32 27.63
AT1G09270.1 Thale cress cytosol 28.32 27.32
AT4G02150.1 Thale cress cytosol 27.55 26.93
AT5G49310.1 Thale cress cytosol 24.28 24.28
AT3G05720.1 Thale cress cytosol 24.47 24.05
AT5G52000.1 Thale cress cytosol 19.65 23.13
AT5G49305.2 Thale cress cytosol 16.96 22.92
AT1G32880.1 Thale cress cytosol 7.32 20.77
Protein Annotations
Gene3D:1.25.10.10MapMan:23.5.1.3EntrezGene:831675ProteinID:AED90553.1InterPro:ARM-likeInterPro:ARM-type_fold
ArrayExpress:AT5G03070EnsemblPlantsGene:AT5G03070RefSeq:AT5G03070TAIR:AT5G03070RefSeq:AT5G03070-TAIR-GEnsemblPlants:AT5G03070.1
TAIR:AT5G03070.1InterPro:ArmadilloUnigene:At.4995ProteinID:CAB86074.1UniProt:F4KF65GO:GO:0003674
GO:GO:0005215GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005635GO:GO:0005643GO:GO:0005654GO:GO:0005737GO:GO:0005829
GO:GO:0006606GO:GO:0006607GO:GO:0006810GO:GO:0008139GO:GO:0008150GO:GO:0008565
GO:GO:0015031GO:GO:0061608Symbol:IMPA-9InterPro:IPR000225InterPro:IPR011989InterPro:Importing_su_alpha
RefSeq:NP_195927.2PFAM:PF00514PIRSF:PIRSF005673PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PANTHER:PTHR23316
PANTHER:PTHR23316:SF1SMART:SM00185SUPFAM:SSF48371UniParc:UPI000150582CSEG:seg:
Description
IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
Coordinates
chr5:-:718136..721559
Molecular Weight (calculated)
56687.0 Da
IEP (calculated)
5.624
GRAVY (calculated)
-0.022
Length
519 amino acids
Sequence
(BLAST)
001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.