Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012741.1-P | Field mustard | cytosol | 63.93 | 95.8 |
| CDY09716 | Canola | cytosol | 94.02 | 94.02 |
| CDY32215 | Canola | cytosol | 92.9 | 93.77 |
| Bra033534.1-P | Field mustard | cytosol | 92.9 | 93.77 |
| CDY34430 | Canola | cytosol | 92.71 | 93.58 |
| CDX90544 | Canola | cytosol | 94.21 | 93.33 |
| CDY22779 | Canola | cytosol | 92.9 | 93.07 |
| Bra038043.1-P | Field mustard | cytosol | 92.9 | 93.07 |
| CDY52043 | Canola | cytosol | 92.71 | 92.88 |
| VIT_05s0077g01430.t01 | Wine grape | cytosol | 86.73 | 87.71 |
| KRH11998 | Soybean | endoplasmic reticulum | 86.36 | 87.01 |
| KRH37030 | Soybean | endoplasmic reticulum, mitochondrion | 85.79 | 86.44 |
| KRH02317 | Soybean | cytosol | 85.05 | 85.85 |
| Bra012740.1-P | Field mustard | cytosol | 25.23 | 85.44 |
| AT3G06720.2 | Thale cress | cytosol | 84.86 | 85.34 |
| KRH50772 | Soybean | cytosol, endoplasmic reticulum | 72.15 | 85.21 |
| Solyc01g060470.2.1 | Tomato | extracellular | 83.74 | 84.53 |
| PGSC0003DMT400038784 | Potato | cytosol | 83.55 | 84.5 |
| AT1G09270.1 | Thale cress | cytosol | 72.52 | 72.12 |
| AT4G02150.1 | Thale cress | cytosol | 71.4 | 71.94 |
| AT1G02690.2 | Thale cress | cytosol | 70.28 | 69.76 |
| Zm00001d042015_P001 | Maize | cytosol | 21.12 | 68.07 |
| AT5G49310.1 | Thale cress | cytosol | 65.05 | 67.05 |
| Zm00001d040153_P004 | Maize | cytosol | 20.37 | 59.56 |
| AT3G05720.1 | Thale cress | cytosol | 58.5 | 59.28 |
| AT1G32880.1 | Thale cress | cytosol | 19.63 | 57.38 |
| AT5G52000.1 | Thale cress | cytosol | 45.98 | 55.78 |
| AT5G49305.2 | Thale cress | cytosol | 36.64 | 51.04 |
| Zm00001d024033_P002 | Maize | plastid | 14.77 | 36.41 |
| AT5G03070.1 | Thale cress | cytosol, plastid | 28.04 | 28.9 |
Protein Annotations
| Gene3D:1.20.5.690 | Gene3D:1.25.10.10 | MapMan:23.5.1.3 | EntrezGene:827302 | ProteinID:AEE83699.1 | ProteinID:AEE83700.1 |
| EMBL:AF361811 | EMBL:AL161543 | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT4G16143 | EnsemblPlantsGene:AT4G16143 |
| RefSeq:AT4G16143 | TAIR:AT4G16143 | RefSeq:AT4G16143-TAIR-G | EnsemblPlants:AT4G16143.2 | TAIR:AT4G16143.2 | EMBL:AY060529 |
| InterPro:Arm_3 | InterPro:Armadillo | Unigene:At.21119 | UniProt:F4JL11 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005654 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006606 | GO:GO:0006607 | GO:GO:0006810 | GO:GO:0008139 | GO:GO:0008150 | GO:GO:0008565 |
| GO:GO:0009506 | GO:GO:0015031 | GO:GO:0061608 | Symbol:IMPA-2 | InterPro:IPR000225 | InterPro:IPR002652 |
| InterPro:IPR011989 | InterPro:IPR036975 | InterPro:Importin-a_IBB | InterPro:Importin-a_IBB_sf | InterPro:Importing_su_alpha | RefSeq:NP_001154239.1 |
| RefSeq:NP_567485.4 | PFAM:PF00514 | PFAM:PF01749 | PFAM:PF16186 | PIRSF:PIRSF005673 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50176 | PFscan:PS51214 | PANTHER:PTHR23316 | PANTHER:PTHR23316:SF22 | SMART:SM00185 |
| SUPFAM:SSF48371 | UniParc:UPI0001A7B0D8 | EMBL:Y14615 | SEG:seg | : | : |
Description
IMPA2Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:F4JL11]
Coordinates
chr4:-:9133750..9137415
Molecular Weight (calculated)
58910.1 Da
IEP (calculated)
4.739
GRAVY (calculated)
-0.273
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLQKKRR EGLQANQLPQ FAPSPVPASS TVEKKLESLP AMVGGVWSDD RSLQLEATTQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.