Factsheet for Bra038043.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22779	Canola	cytosol	99.63	99.63
Bra012741.1-P	Field mustard	cytosol	62.92	94.12
Bra033534.1-P	Field mustard	cytosol	93.07	93.77
AT4G16143.2	Thale cress	cytosol	93.07	92.9
Bra012740.1-P	Field mustard	cytosol	26.59	89.87
VIT_05s0077g01430.t01	Wine grape	cytosol	84.46	85.26
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	83.71	84.18
KRH11998	Soybean	endoplasmic reticulum	83.71	84.18
KRH02317	Soybean	cytosol	83.15	83.77
KRH50772	Soybean	cytosol, endoplasmic reticulum	70.6	83.22
PGSC0003DMT400038784	Potato	cytosol	82.4	83.18
Solyc01g060470.2.1	Tomato	extracellular	82.4	83.02
Bra018570.1-P	Field mustard	cytosol	74.16	73.06
Bra008559.1-P	Field mustard	cytosol	70.22	70.62
Bra000891.1-P	Field mustard	cytosol	66.1	68.15
Bra033342.1-P	Field mustard	cytosol	65.36	66.99
Bra020649.1-P	Field mustard	cytosol	65.54	65.79
Zm00001d042015_P001	Maize	cytosol	19.85	63.86
Zm00001d040153_P004	Maize	cytosol	19.85	57.92
Bra039416.1-P	Field mustard	cytosol	54.12	57.92
Bra030765.1-P	Field mustard	cytosol	74.72	52.92
Bra030771.1-P	Field mustard	cytosol	36.89	45.29
Zm00001d024033_P002	Maize	plastid	13.86	34.1
Bra028852.1-P	Field mustard	cytosol	27.72	28.08
Bra009550.1-P	Field mustard	plastid	13.48	24.66

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3
InterPro:Armadillo	EnsemblPlantsGene:Bra038043	EnsemblPlants:Bra038043.1	EnsemblPlants:Bra038043.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031
GO:GO:0061608	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB
InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	UniProt:M4FAC9	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186
PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI0002545DE8	SEG:seg	:	:	:

Description

AT4G16143 (E=3e-276) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter

Coordinates

chrA08:-:6969211..6971901

Molecular Weight (calculated)

58699.8 Da

IEP (calculated)

4.733

GRAVY (calculated)

-0.240

Length

534 amino acids

Sequence
(BLAST)

001: MSLRPNARTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKTK REESLLKKRR EGLQSTQQPQ FAPSSVASAT SVEKKLESLP SMVGGVWSDD RNLQLEATTQ
101: FRKLLSIERS PPIEEVIAAG VVPRFVEFLK RDDYPQLQFE AAWALTNIAS GTSEHTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPQCRDL
201: VLGQGALLPL LSQLNEHAKL SMLRNATWTL SNFCGGKPQP PFEQVSPALP ALERLIHSTD EEVLTDACWA LSYLSDGINE KIQSVIQAGV VPRLVELLEH
301: PSPSVLIPAL RTIGNIVTGD DAQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLIFPLV NLLQNAEFDI KKEAAWAVSN
401: ATSGGSPDQI KYMVDQGVVK PLCDLLICPD PRIITVCLEG LENILKVGEA EKLTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DVSAQGFQFG GNDAAAPPGG FNFQ

Best Arabidopsis Sequence Match ( AT4G16143.1 )
(BLAST)

001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLQKKRR EGLQANQLPQ FAPSPVPASS TVEKKLESLP AMVGGVWSDD RSLQLEATTQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ

Arabidopsis Description

IMPA2Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:F4JL11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.