Factsheet for Bra008559.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001598.1-P
Bra004940.1-P
Bra006453.1-P
Bra006526.1-P
Bra012753.1-P
Bra013602.1-P
Bra013840.1-P
Bra015506.1-P
Bra018049.1-P
Bra018972.1-P
Bra019205.1-P
Bra020076.1-P
Bra021117.1-P
Bra023895.1-P
Bra024914.1-P
Bra027232.1-P
Bra029904.1-P
Bra032176.1-P
Bra035650.1-P
Bra039224.1-P
Bra039311.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02150.1	Bra015506.1-P	AT1G06510.1	21798944
AT4G02150.1	Bra018972.1-P	AT1G52560.1	21798944
AT4G02150.1	Bra032176.1-P	AT2G23290.1	21798944
AT4G02150.1	Bra039224.1-P	AT2G24020.1	21798944
AT4G02150.1	Bra004940.1-P	AT2G45820.1	21798944
AT4G02150.1	Bra039311.1-P	AT2G45820.1	21798944
AT4G02150.1	Bra001598.1-P	AT3G15540.1	21798944
AT4G02150.1	Bra021117.1-P	AT3G15540.1	21798944
AT4G02150.1	Bra027232.1-P	AT3G15540.1	21798944
AT4G02150.1	Bra023895.1-P	AT3G21215.1	21798944
AT4G02150.1	Bra018049.1-P	AT3G48550.1	21798944
AT4G02150.1	Bra029904.1-P	AT3G48550.1	21798944
AT4G02150.1	Bra012753.1-P	AT4G15900.1	9765207
AT4G02150.1	Bra013602.1-P	AT4G22240.1	21798944
AT4G02150.1	Bra006453.1-P	AT4G24840.1	21798944
AT4G02150.1	Bra013840.1-P	AT4G24840.1	21798944
AT4G02150.1	Bra019205.1-P	AT4G24840.1	21798944
AT4G02150.1	Bra006526.1-P	AT5G19960.1	21798944
AT4G02150.1	Bra020076.1-P	AT5G19960.1	21798944
AT4G02150.1	Bra024914.1-P	AT5G47810.1	21798944
AT4G02150.1	Bra035650.1-P	AT5G57120.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97257	Canola	cytosol	99.62	99.62
AT4G02150.1	Thale cress	cytosol	83.99	83.99
Bra000891.1-P	Field mustard	cytosol	77.97	79.92
VIT_07s0005g01100.t01	Wine grape	cytosol	73.07	73.35
Solyc06g009750.2.1	Tomato	nucleus	71.37	71.92
PGSC0003DMT400018802	Potato	cytosol	71.37	71.92
Bra012741.1-P	Field mustard	cytosol	47.46	70.59
Os01t0253300-01	Rice	cytosol	69.87	70.53
TraesCS3D01G178500.1	Wheat	cytosol	69.3	70.23
TraesCS3A01G172000.1	Wheat	golgi, nucleus	69.3	70.23
Bra038043.1-P	Field mustard	cytosol	70.62	70.22
Bra033534.1-P	Field mustard	cytosol	69.68	69.81
KXG32187	Sorghum	cytosol	69.3	69.7
Zm00001d008345_P003	Maize	cytosol	69.49	69.62
Zm00001d040274_P001	Maize	cytosol	69.3	69.57
Bra033342.1-P	Field mustard	cytosol	67.98	69.29
HORVU3Hr1G034750.5	Barley	cytosol	69.3	69.04
TraesCS3B01G202800.2	Wheat	cytosol	67.42	66.67
Bra012740.1-P	Field mustard	cytosol	19.21	64.56
Bra018570.1-P	Field mustard	cytosol	64.6	63.28
Bra020649.1-P	Field mustard	cytosol	58.57	58.46
Bra039416.1-P	Field mustard	cytosol	48.02	51.1
Bra030765.1-P	Field mustard	cytosol	64.6	45.49
Bra030771.1-P	Field mustard	cytosol	32.39	39.54
PGSC0003DMT400076768	Potato	cytosol, extracellular, mitochondrion, plastid	6.4	38.2
Bra028852.1-P	Field mustard	cytosol	26.37	26.57
Bra009550.1-P	Field mustard	plastid	13.94	25.34

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3
InterPro:Armadillo	EnsemblPlantsGene:Bra008559	EnsemblPlants:Bra008559.1	EnsemblPlants:Bra008559.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031
GO:GO:0061608	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB
InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	UniProt:M4CWG2	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186
PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF53	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI00025471DB	SEG:seg	:	:	:

Description

AT4G02150 (E=3e-239) MOS6, ATIMPALPHA3, IMPA-3 | MOS6 (MODIFIER OF SNC1, 6); binding / protein transporter

Coordinates

chrA02:-:16569003..16571422

Molecular Weight (calculated)

58326.6 Da

IEP (calculated)

4.895

GRAVY (calculated)

-0.224

Length

531 amino acids

Sequence
(BLAST)

001: MSLRPSAKTE VRRNRYKVAV DAEEGRRRRE DHMVEIRKNK REENLQKKRR EGISAAPQSG QVDLPSAKKL IENLPEMVAG IWSEDANLQL ETTTLLRKLL
101: SLEQNPPIND VVGSGVVPRV VTFLSRDDFP KLQFEAAWAL TNIASGTSEN TNVIIQSGAI PIFIHLLTSP NEEVREQAVW ALGNVAGDSP KCRDLVLSLG
201: AMLPLLSQFT EQTKLSMLRN ATWTLSNFCR GKPQPSFEQT SPALPVLKKL VQSTDEEILT DACWALSYLS DSSNDKIQAV IDAGVIPRLI DLLAHSAPAV
301: LIPALRTIGN IVTGDDTQTQ TVLDHQVLPR LLHLLTNPYK KSIKKEACWT ISNITAGCSQ QIQGVIEAGI IQSLVGVLHN AEFEVKKEAA WGISNATSGG
401: THDQIKFLVS QGCIKPLCDL LTCPDPRILT VCLEALENIL VVGEAVKSLG HTGEDNPYAS MIDEAEGLEK IENLQSHDNN DIYQKAVKIL ETFWTEDDDE
501: EGCNDENHAP QAGFQFGSAN VAAAPGQFNF M

Best Arabidopsis Sequence Match ( AT4G02150.1 )
(BLAST)

001: MSLRPSAKTE VRRNRYKVAV DAEEGRRRRE DNLVEIRKNK REENLQKKRF TSSMAFGSAT GQTEQDLSSA NQLKDNLPAM VAGIWSEDSN SQLEATNLLR
101: KLLSIEQNPP INEVVQSGVV PRVVKFLSRD DFPKLQFEAA WALTNIASGT SENTNVIIES GAVPIFIQLL SSASEDVREQ AVWALGNVAG DSPKCRDLVL
201: SYGAMTPLLS QFNENTKLSM LRNATWTLSN FCRGKPPPAF EQTQPALPVL ERLVQSMDEE VLTDACWALS YLSDNSNDKI QAVIEAGVVP RLIQLLGHSS
301: PSVLIPALRT IGNIVTGDDL QTQMVLDQQA LPCLLNLLKN NYKKSIKKEA CWTISNITAG NADQIQAVID AGIIQSLVWV LQSAEFEVKK EAAWGISNAT
401: SGGTHDQIKF MVSQGCIKPL CDLLTCPDLK VVTVCLEALE NILVVGEAEK NLGHTGEDNL YAQMIDEAEG LEKIENLQSH DNNDIYDKAV KILETFWTED
501: NEEEGNDENH APQSGFQFGS TNVPPGQFNF I

Arabidopsis Description

IMPA3Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:O04294]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.