Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • cytosol 1
  • plasma membrane 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra004940.1-P
Bra018439.1-P
Bra019932.1-P
Bra031714.1-P
Bra036963.1-P
Bra039311.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G45820.1 Bra018439.1-P AT1G10470.1 9771897
AT2G45820.1 Bra019932.1-P AT1G10470.1 9771897
AT2G45820.1 Bra031714.1-P AT1G10470.1 9771897
AT2G45820.1 Bra036963.1-P AT1G10470.1 9771897
AT2G45820.1 Bra004940.1-P AT2G45820.1 21798944
AT2G45820.1 Bra039311.1-P AT2G45820.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37068 Canola nucleus 97.95 97.95
CDY06318 Canola cytosol, nucleus, plastid 96.92 96.92
CDY27356 Canola nucleus 91.79 91.79
Bra004940.1-P Field mustard nucleus 85.13 86.46
AT2G45820.1 Thale cress cytosol 80.51 82.63
PGSC0003DMT400055730 Potato cytosol 18.46 69.23
KRH48177 Soybean plasma membrane 62.56 61.62
Bra007589.1-P Field mustard nucleus 60.51 60.82
KRH00705 Soybean cytosol, nucleus, plastid 56.92 60.66
Bra018025.1-P Field mustard cytosol, mitochondrion, nucleus 53.85 60.0
PGSC0003DMT400000462 Potato cytosol, mitochondrion, nucleus, plastid 52.82 59.2
VIT_15s0046g03180.t01 Wine grape nucleus 58.97 58.67
GSMUA_Achr1P00240_001 Banana nucleus 57.44 58.33
Solyc01g094370.2.1 Tomato plastid 51.28 57.47
KRH40491 Soybean cytosol 53.85 57.38
KRH65100 Soybean cytosol 58.46 57.0
Solyc05g048820.2.1 Tomato nucleus, plastid 44.62 56.86
Zm00001d002842_P001 Maize extracellular, mitochondrion, plasma membrane 57.95 56.78
GSMUA_Achr1P03030_001 Banana nucleus 54.87 56.32
TraesCS2A01G369800.1 Wheat nucleus 59.49 55.24
GSMUA_Achr11P... Banana nucleus 55.38 55.1
GSMUA_Achr4P25330_001 Banana nucleus 50.26 55.06
EES12557 Sorghum cytosol 58.97 54.25
Bra026483.1-P Field mustard nucleus 54.36 53.81
TraesCS2B01G386900.1 Wheat nucleus 58.97 53.74
TraesCS6B01G265700.2 Wheat cytosol 52.31 53.4
TraesCS2D01G366300.2 Wheat nucleus 58.46 53.27
TraesCS6D01G219800.1 Wheat cytosol 51.79 52.88
TraesCS6A01G237200.2 Wheat cytosol 51.79 52.33
TraesCS1D01G164300.1 Wheat nucleus 46.67 51.41
TraesCS1A01G174700.1 Wheat nucleus 46.67 51.41
Bra009707.1-P Field mustard nucleus 53.85 51.22
Zm00001d025932_P003 Maize mitochondrion 52.31 51.0
KXG31130 Sorghum cytosol 50.77 50.51
Os03t0111200-01 Rice nucleus 45.13 50.29
EER92997 Sorghum nucleus 46.15 49.72
GSMUA_Achr5P12250_001 Banana cytosol 47.18 49.46
Zm00001d017386_P001 Maize cytosol 47.18 49.46
TraesCS5A01G554600.1 Wheat cytosol 44.62 49.15
TraesCSU01G033600.1 Wheat cytosol 44.1 49.14
HORVU4Hr1G089540.2 Barley cytosol 44.1 49.14
TraesCS4B01G393000.1 Wheat cytosol 44.1 49.14
EER93970 Sorghum nucleus 38.97 49.03
Os04t0533300-02 Rice extracellular, plasma membrane 51.28 47.85
HORVU6Hr1G060700.5 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 45.64 46.6
Zm00001d027330_P001 Maize extracellular, mitochondrion, plasma membrane 43.59 46.45
Solyc10g017540.2.1 Tomato nucleus 43.59 44.97
Os02t0642200-01 Rice plasma membrane 46.67 44.83
PGSC0003DMT400026584 Potato nucleus 43.59 44.5
HORVU1Hr1G045920.1 Barley nucleus 22.05 40.57
GSMUA_Achr5P10760_001 Banana cytosol 50.77 36.94
Os10t0503800-01 Rice nucleus 24.1 35.34
HORVU2Hr1G091680.3 Barley cytosol, plasma membrane 51.79 33.67
Bra027633.1-P Field mustard cytosol 26.15 31.68
Bra000964.1-P Field mustard cytosol, mitochondrion, nucleus 17.95 26.52
Protein Annotations
EnsemblPlants:Bra039311.1EnsemblPlants:Bra039311.1-PEnsemblPlantsGene:Bra039311InterPro:Remorin_CInterPro:Remorin_Nncoils:Coil
PANTHER:PTHR31775PANTHER:PTHR31775:SF2PFAM:PF03763PFAM:PF03766SEG:segUniParc:UPI0002544452
UniProt:M4FDZ0MapMan:35.1::::
Description
AT2G45820 (E=8e-061) | DNA-binding protein, putative
Coordinates
chrA04:-:18654221..18655674
Molecular Weight (calculated)
21467.5 Da
IEP (calculated)
5.985
GRAVY (calculated)
-0.841
Length
195 amino acids
Sequence
(BLAST)
001: MAEEQKTTKV DVESPAVLAP SNEPAPAPVE ASTEVAEEKV HDPPPPVESK ALAVVEKPIE EPTPKKSSSG SVDRDVKLAD LEKEKKTSFI KAWEESEKSK
101: AENKAQKKVS DVLAWENSQK AAVEAQLRKI EEKLEKKKAE YGEKMKNKVA AIHKEAEEKR AMVEAKRGEE LLKAEEMAAK YRATGIVPKA TCGCF
Best Arabidopsis Sequence Match ( AT2G45820.1 )
(BLAST)
001: MAEEQKTSKV DVESPAVLAP AKEPTPAPVE VADEKIHNPP PVESKALAVV EKPIEEHTPK KASSGSADRD VILADLEKEK KTSFIKAWEE SEKSKAENRA
101: QKKISDVHAW ENSKKAAVEA QLRKIEEKLE KKKAQYGEKM KNKVAAIHKL AEEKRAMVEA KKGEELLKAE EMGAKYRATG VVPKATCGCF
Arabidopsis Description
DBPRemorin [Source:UniProtKB/Swiss-Prot;Acc:O80837]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.