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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • cytosol 1
  • plasma membrane 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71834 Canola cytosol, mitochondrion, nucleus 89.71 89.2
AT3G48940.1 Thale cress nucleus 77.71 77.71
KRH35326 Soybean nucleus 66.29 59.79
PGSC0003DMT400037192 Potato cytosol 67.43 59.6
Solyc06g035920.2.1 Tomato nucleus 62.86 59.46
Bra026483.1-P Field mustard nucleus 66.86 59.39
Solyc03g025850.2.1 Tomato nucleus 66.86 59.39
GSMUA_Achr7P04410_001 Banana plasma membrane 57.71 59.06
KRG91502 Soybean nucleus 65.71 58.38
Solyc06g035910.1.1 Tomato cytosol, mitochondrion, nucleus 24.0 58.33
Bra009707.1-P Field mustard nucleus 67.43 57.56
VIT_16s0050g00080.t01 Wine grape nucleus 63.43 56.63
KRH38487 Soybean nucleus 65.14 55.34
KRH09020 Soybean nucleus 64.0 54.63
Bra039311.1-P Field mustard cytosol, nucleus, plastid 60.0 53.85
Bra004940.1-P Field mustard nucleus 56.0 51.04
Bra007589.1-P Field mustard nucleus 55.43 50.0
Solyc06g035900.1.1 Tomato cytosol 16.57 33.33
Bra027633.1-P Field mustard cytosol 29.71 32.3
Bra000964.1-P Field mustard cytosol, mitochondrion, nucleus 17.14 22.73
Protein Annotations
EnsemblPlants:Bra018025.1EnsemblPlants:Bra018025.1-PEnsemblPlantsGene:Bra018025InterPro:Remorin_CInterPro:Remorin_Nncoils:Coil
PANTHER:PTHR31775PANTHER:PTHR31775:SF5PFAM:PF03763PFAM:PF03766SEG:segUniParc:UPI000253F293
UniProt:M4DND8MapMan:35.1::::
Description
AT3G48940 (E=8e-057) | remorin family protein
Coordinates
chrA06:+:9577356..9578711
Molecular Weight (calculated)
19680.4 Da
IEP (calculated)
8.417
GRAVY (calculated)
-0.984
Length
175 amino acids
Sequence
(BLAST)
001: MTQEEQKKNV TEPKTAVSNP SPPSSEEKTD ESKALVLIVA KEPVEEKKEG SVNRDDVLAK LETEKRMSLI KAWEEAEKSK VENKAQKKLS SVGAWENSKK
101: ASAEAELKKI EEQLIKKKAE YAEQMKNKIV QIHKEAEEKR AMTEAKRGEE ILKAEEMAAN YRATGTAPTK LFGCF
Best Arabidopsis Sequence Match ( AT3G48940.1 )
(BLAST)
001: MTLEEQKKVI MPEAVASEPS PPSKEEKSDD SKAIVLVVAA KEPTEDKKVG SVHRDAVLVR LEQDKRISLI KAWEEAEKSK VENKAQKKIS SVGAWENSKK
101: ASVEAELKKI EEQLNKKKAH YTEQMKNKIA QIHKEAEEKR AMTEAKRGED VLKAEEMAAK YRATGTAPTK LFGFF
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.