Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09020 | Soybean | nucleus | 91.75 | 92.2 |
| CDY69344 | Canola | cytosol | 47.09 | 74.62 |
| KRG91502 | Soybean | nucleus | 69.42 | 72.59 |
| KRH35326 | Soybean | nucleus | 67.48 | 71.65 |
| VIT_16s0050g00080.t01 | Wine grape | nucleus | 65.53 | 68.88 |
| CDY05883 | Canola | mitochondrion | 38.84 | 66.67 |
| Bra018025.1-P | Field mustard | cytosol, mitochondrion, nucleus | 55.34 | 65.14 |
| GSMUA_Achr7P04410_001 | Banana | plasma membrane | 52.43 | 63.16 |
| PGSC0003DMT400037192 | Potato | cytosol | 60.68 | 63.13 |
| Solyc03g025850.2.1 | Tomato | nucleus | 60.19 | 62.94 |
| AT3G48940.1 | Thale cress | nucleus | 53.4 | 62.86 |
| CDY71834 | Canola | cytosol, mitochondrion, nucleus | 53.4 | 62.5 |
| Solyc06g035920.2.1 | Tomato | nucleus | 55.34 | 61.62 |
| Bra026483.1-P | Field mustard | nucleus | 56.8 | 59.39 |
| CDX87157 | Canola | cytosol | 55.83 | 59.28 |
| Solyc06g035910.1.1 | Tomato | cytosol, mitochondrion, nucleus | 20.39 | 58.33 |
| KRH48177 | Soybean | plasma membrane | 55.34 | 57.58 |
| CDX88048 | Canola | nucleus | 56.31 | 56.59 |
| Bra009707.1-P | Field mustard | nucleus | 56.31 | 56.59 |
| KRH65100 | Soybean | cytosol | 54.85 | 56.5 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 49.51 | 55.74 |
| KRH40491 | Soybean | cytosol | 48.06 | 54.1 |
| AT5G23750.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 57.77 | 51.97 |
| KRH77513 | Soybean | cytosol, nucleus, plastid | 43.2 | 46.6 |
| KRH41149 | Soybean | extracellular | 40.29 | 42.78 |
| KRH59848 | Soybean | extracellular | 37.86 | 42.62 |
| KRH27955 | Soybean | nucleus | 40.78 | 39.07 |
| Solyc06g035900.1.1 | Tomato | cytosol | 13.59 | 32.18 |
Protein Annotations
| EMBL:ACUP02005823 | EnsemblPlants:KRH38487 | EnsemblPlantsGene:GLYMA_09G139200 | InterPro:Remorin_C | InterPro:Remorin_N | ncoils:Coil |
| PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | PFAM:PF03763 | PFAM:PF03766 | ProteinID:KRH38487 | ProteinID:KRH38487.1 |
| SEG:seg | UniParc:UPI00023C9964 | UniProt:I1L377 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr9:-:34623697..34626799
Molecular Weight (calculated)
22469.5 Da
IEP (calculated)
5.557
GRAVY (calculated)
-0.778
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEEQTKTVE SESVTPPPAA AAPSQVPPAA EAEHVPEAPK DVTEEKSVIP VPSSDDKPDE SKALVLVEKT QEVAEVKPTE GSINRDAVLA RVATEKRLSL
101: IKAWEESEKS KAENKAHKKL SSVSAWENSK KAAVEADLKK IEEELEKKKA EAAEKIKNKI ATIHKEAEER RAIIEAKKGE DLLKAEEQAA KYRATGTAPK
201: KLLGCF
101: IKAWEESEKS KAENKAHKKL SSVSAWENSK KAAVEADLKK IEEELEKKKA EAAEKIKNKI ATIHKEAEER RAIIEAKKGE DLLKAEEQAA KYRATGTAPK
201: KLLGCF
001: MTLEEQKKVI MPEAVASEPS PPSKEEKSDD SKAIVLVVAA KEPTEDKKVG SVHRDAVLVR LEQDKRISLI KAWEEAEKSK VENKAQKKIS SVGAWENSKK
101: ASVEAELKKI EEQLNKKKAH YTEQMKNKIA QIHKEAEEKR AMTEAKRGED VLKAEEMAAK YRATGTAPTK LFGFF
101: ASVEAELKKI EEQLNKKKAH YTEQMKNKIA QIHKEAEEKR AMTEAKRGED VLKAEEMAAK YRATGTAPTK LFGFF
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.