Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 1
- plasma membrane 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69344 | Canola | cytosol | 50.51 | 76.15 |
| CDY05883 | Canola | mitochondrion | 40.82 | 66.67 |
| KRH38487 | Soybean | nucleus | 68.88 | 65.53 |
| KRH09020 | Soybean | nucleus | 68.37 | 65.37 |
| KRG91502 | Soybean | nucleus | 65.31 | 64.97 |
| KRH35326 | Soybean | nucleus | 63.78 | 64.43 |
| GSMUA_Achr7P04410_001 | Banana | plasma membrane | 56.12 | 64.33 |
| PGSC0003DMT400037192 | Potato | cytosol | 64.8 | 64.14 |
| Bra018025.1-P | Field mustard | cytosol, mitochondrion, nucleus | 56.63 | 63.43 |
| Solyc03g025850.2.1 | Tomato | nucleus | 63.27 | 62.94 |
| Solyc06g035910.1.1 | Tomato | cytosol, mitochondrion, nucleus | 22.96 | 62.5 |
| Bra026483.1-P | Field mustard | nucleus | 61.73 | 61.42 |
| CDY71834 | Canola | cytosol, mitochondrion, nucleus | 55.1 | 61.36 |
| CDX87157 | Canola | cytosol | 60.71 | 61.34 |
| AT3G48940.1 | Thale cress | nucleus | 54.59 | 61.14 |
| Solyc06g035920.2.1 | Tomato | nucleus | 57.14 | 60.54 |
| CDX88048 | Canola | nucleus | 61.73 | 59.02 |
| Bra009707.1-P | Field mustard | nucleus | 61.73 | 59.02 |
| VIT_15s0046g03180.t01 | Wine grape | nucleus | 58.16 | 58.16 |
| VIT_02s0025g03780.t01 | Wine grape | nucleus | 52.55 | 55.08 |
| AT5G23750.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 64.29 | 55.02 |
| Solyc06g035900.1.1 | Tomato | cytosol | 13.78 | 31.03 |
Protein Annotations
| EntrezGene:100260907 | wikigene:100260907 | MapMan:35.1 | UniProt:A5C962 | EMBL:AM486653 | ProteinID:CAN73187 |
| ProteinID:CAN73187.1 | ProteinID:CBI22753 | ProteinID:CBI22753.3 | ncoils:Coil | EMBL:FN595243 | EntrezGene:LOC100260907 |
| wikigene:LOC100260907 | PFAM:PF03763 | PFAM:PF03766 | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | InterPro:Remorin_C |
| InterPro:Remorin_N | TIGR:TC52480 | TIGR:TC58287 | UniParc:UPI0001522B13 | ArrayExpress:VIT_16s0050g00080 | EnsemblPlantsGene:VIT_16s0050g00080 |
| EnsemblPlants:VIT_16s0050g00080.t01 | RefSeq:XP_002267609 | RefSeq:XP_002267609.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr16:-:16921360..16925884
Molecular Weight (calculated)
21756.8 Da
IEP (calculated)
4.950
GRAVY (calculated)
-0.934
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAEEPKTVA ESETPTDPPP PEPTEAPKDV TEEKAVIPPA PPPEEKPDET KALAIVEKVP EPIEEKGSEG GSVNRDTVLA RVATEKRLSL IRAWEESEKC
101: KAENKAQKKL SATEAWENSQ KASVEAELKK IEENLERKKA EYVEKMKNKI AIIHKEAEEK RAMIEARRGE DLLKAEEMAA KYRATGSAPK KLLGCF
101: KAENKAQKKL SATEAWENSQ KASVEAELKK IEENLERKKA EYVEKMKNKI AIIHKEAEEK RAMIEARRGE DLLKAEEMAA KYRATGSAPK KLLGCF
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.