Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69344 | Canola | cytosol | 65.46 | 97.69 |
| Bra026483.1-P | Field mustard | nucleus | 87.63 | 86.29 |
| CDX88048 | Canola | nucleus | 79.9 | 75.61 |
| CDY05883 | Canola | mitochondrion | 42.78 | 69.17 |
| CDY71834 | Canola | cytosol, mitochondrion, nucleus | 60.31 | 66.48 |
| AT5G23750.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 76.8 | 65.07 |
| GSMUA_Achr7P04410_001 | Banana | plasma membrane | 54.12 | 61.4 |
| PGSC0003DMT400037192 | Potato | cytosol | 62.37 | 61.11 |
| VIT_16s0050g00080.t01 | Wine grape | nucleus | 61.34 | 60.71 |
| Solyc03g025850.2.1 | Tomato | nucleus | 61.34 | 60.41 |
| KRG91502 | Soybean | nucleus | 59.79 | 58.88 |
| KRH35326 | Soybean | nucleus | 57.73 | 57.73 |
| Solyc06g035920.2.1 | Tomato | nucleus | 53.61 | 56.22 |
| KRH38487 | Soybean | nucleus | 59.28 | 55.83 |
| Solyc06g035910.1.1 | Tomato | cytosol, mitochondrion, nucleus | 20.62 | 55.56 |
| KRH09020 | Soybean | nucleus | 58.25 | 55.12 |
| CDX71754 | Canola | cytosol, mitochondrion, nucleus | 49.48 | 53.33 |
| CDX74768 | Canola | nucleus | 52.58 | 53.12 |
| CDY18898 | Canola | cytosol | 52.58 | 53.12 |
| CDY37068 | Canola | nucleus | 53.09 | 52.82 |
| CDY06318 | Canola | cytosol, nucleus, plastid | 52.58 | 52.31 |
| CDY27356 | Canola | nucleus | 52.58 | 52.31 |
| CDY48933 | Canola | cytosol | 51.03 | 51.03 |
| CDY66598 | Canola | cytosol, nucleus, plastid | 18.56 | 34.62 |
| Solyc06g035900.1.1 | Tomato | cytosol | 13.92 | 31.03 |
| CDX91900 | Canola | cytosol, mitochondrion, nucleus | 16.49 | 24.24 |
| CDX74343 | Canola | nucleus | 16.49 | 24.24 |
Protein Annotations
| EnsemblPlants:CDX87157 | EnsemblPlantsGene:GSBRNA2T00146078001 | InterPro:Remorin_C | InterPro:Remorin_N | ncoils:Coil | PANTHER:PTHR31775 |
| PANTHER:PTHR31775:SF5 | PFAM:PF03763 | PFAM:PF03766 | ProteinID:CDX87157 | ProteinID:CDX87157.1 | SEG:seg |
| UniParc:UPI0004EB3AE3 | MapMan:35.1 | : | : | : | : |
Description
BnaC09g04720D
Coordinates
chrLK031849:+:830093..831919
Molecular Weight (calculated)
21682.0 Da
IEP (calculated)
5.355
GRAVY (calculated)
-0.758
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEEPKKVT ETVNNVSEPS PSLPDPAEKA VAAAVVAQPP PASVEEKLED SKALVPIVAK EVEEEKKEGS INRDAVLARV ETEKRMSLIK AWEEAEKCKV
101: ENKAEKKLSS IESWENNKKA AVEAELKKIE EQLEKKKAEY VELMKNKIAQ IHKQAEEKRA MIEARRGEEV LKAEELAAKY RASGTAPKKL FGFM
101: ENKAEKKLSS IESWENNKKA AVEAELKKIE EQLEKKKAEY VELMKNKIAQ IHKQAEEKRA MIEARRGEEV LKAEELAAKY RASGTAPKKL FGFM
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.