Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- mitochondrion 3
- cytosol 1
- plasma membrane 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69344 | Canola | cytosol | 51.53 | 90.77 |
| Bra026483.1-P | Field mustard | nucleus | 66.38 | 77.16 |
| CDX87157 | Canola | cytosol | 65.07 | 76.8 |
| Bra009707.1-P | Field mustard | nucleus | 68.12 | 76.1 |
| CDX88048 | Canola | nucleus | 68.12 | 76.1 |
| AT3G48940.1 | Thale cress | nucleus | 51.97 | 68.0 |
| PGSC0003DMT400037192 | Potato | cytosol | 56.33 | 65.15 |
| Solyc03g025850.2.1 | Tomato | nucleus | 55.46 | 64.47 |
| VIT_16s0050g00080.t01 | Wine grape | nucleus | 55.02 | 64.29 |
| GSMUA_Achr7P04410_001 | Banana | plasma membrane | 47.16 | 63.16 |
| KRH35326 | Soybean | nucleus | 51.09 | 60.31 |
| KRG91502 | Soybean | nucleus | 51.53 | 59.9 |
| Solyc06g035910.1.1 | Tomato | cytosol, mitochondrion, nucleus | 18.78 | 59.72 |
| KRH38487 | Soybean | nucleus | 51.97 | 57.77 |
| KRH09020 | Soybean | nucleus | 51.53 | 57.56 |
| Solyc06g035920.2.1 | Tomato | nucleus | 45.85 | 56.76 |
| AT2G45820.1 | Thale cress | cytosol | 44.54 | 53.68 |
| AT3G61260.1 | Thale cress | nucleus | 46.29 | 50.0 |
| AT1G63295.2 | Thale cress | endoplasmic reticulum, nucleus, plastid | 27.51 | 32.98 |
| Solyc06g035900.1.1 | Tomato | cytosol | 12.23 | 32.18 |
| AT4G00670.1 | Thale cress | nucleus | 16.59 | 30.89 |
Protein Annotations
| ArrayExpress:AT5G23750 | EnsemblPlants:AT5G23750.3 | EnsemblPlantsGene:AT5G23750 | EntrezGene:832440 | InterPro:Remorin_C | InterPro:Remorin_N |
| ncoils:Coil | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | PFAM:PF03763 | PFAM:PF03766 | ProteinID:ANM70284.1 |
| RefSeq:AT5G23750 | RefSeq:AT5G23750-TAIR-G | RefSeq:NP_001331907.1 | SEG:seg | TAIR:AT5G23750 | UniParc:UPI00016EB840 |
| UniProt:A0A1P8BFC2 | MapMan:35.1 | : | : | : | : |
Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
Coordinates
chr5:-:8009780..8011702
Molecular Weight (calculated)
25365.4 Da
IEP (calculated)
6.181
GRAVY (calculated)
-0.803
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTRNRTSLP NISSSVSSNK NIVVPNIMAE EEPKKVTETV SEPTPTPEVP VEKPAAAADV APQEKPVAPP PVLPSPAPAE EKQEDSKAIV PVVPKEVEEE
101: KKEGSVNRDA VLARVETEKR MSLIKAWEEA EKCKVENKAE KKLSSIGSWE NNKKAAVEAE LKKMEEQLEK KKAEYVEQMK NKIAQIHKEA EEKRAMIEAK
201: RGEEILKAEE LAAKYRATGT APKKLFGCM
101: KKEGSVNRDA VLARVETEKR MSLIKAWEEA EKCKVENKAE KKLSSIGSWE NNKKAAVEAE LKKMEEQLEK KKAEYVEQMK NKIAQIHKEA EEKRAMIEAK
201: RGEEILKAEE LAAKYRATGT APKKLFGCM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.