Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71754 | Canola | cytosol, mitochondrion, nucleus | 61.32 | 72.22 |
| CDY48933 | Canola | cytosol | 62.74 | 68.56 |
| AT2G45820.1 | Thale cress | cytosol | 61.32 | 68.42 |
| Bra007589.1-P | Field mustard | nucleus | 62.26 | 68.04 |
| PGSC0003DMT400055730 | Potato | cytosol | 15.57 | 63.46 |
| VIT_15s0046g03180.t01 | Wine grape | nucleus | 56.13 | 60.71 |
| AT3G48940.1 | Thale cress | nucleus | 49.06 | 59.43 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 50.0 | 57.92 |
| GSMUA_Achr1P03030_001 | Banana | nucleus | 51.42 | 57.37 |
| GSMUA_Achr1P00240_001 | Banana | nucleus | 51.89 | 57.29 |
| KRH40491 | Soybean | cytosol | 48.58 | 56.28 |
| GSMUA_Achr4P25330_001 | Banana | nucleus | 47.17 | 56.18 |
| KRH48177 | Soybean | plasma membrane | 52.36 | 56.06 |
| Zm00001d002842_P001 | Maize | extracellular, mitochondrion, plasma membrane | 52.36 | 55.78 |
| Solyc01g094370.2.1 | Tomato | plastid | 45.75 | 55.75 |
| Solyc05g048820.2.1 | Tomato | nucleus, plastid | 40.09 | 55.56 |
| PGSC0003DMT400000462 | Potato | cytosol, mitochondrion, nucleus, plastid | 45.28 | 55.17 |
| GSMUA_Achr11P... | Banana | nucleus | 50.0 | 54.08 |
| KRH65100 | Soybean | cytosol | 50.94 | 54.0 |
| EES12557 | Sorghum | cytosol | 53.77 | 53.77 |
| EER93970 | Sorghum | nucleus | 39.15 | 53.55 |
| Os03t0111200-01 | Rice | nucleus | 43.87 | 53.14 |
| TraesCS2A01G369800.1 | Wheat | nucleus | 52.36 | 52.86 |
| TraesCS1A01G174700.1 | Wheat | nucleus | 43.87 | 52.54 |
| EER92997 | Sorghum | nucleus | 44.81 | 52.49 |
| TraesCS2D01G366300.2 | Wheat | nucleus | 52.83 | 52.34 |
| TraesCS1D01G164300.1 | Wheat | nucleus | 43.4 | 51.98 |
| TraesCS2B01G386900.1 | Wheat | nucleus | 52.36 | 51.87 |
| KXG31130 | Sorghum | cytosol | 47.17 | 51.02 |
| TraesCS6D01G219800.1 | Wheat | cytosol | 45.75 | 50.79 |
| TraesCS6B01G265700.2 | Wheat | cytosol | 45.28 | 50.26 |
| TraesCS6A01G237200.2 | Wheat | cytosol | 45.28 | 49.74 |
| TraesCS5A01G554600.1 | Wheat | cytosol | 40.57 | 48.59 |
| Zm00001d025932_P003 | Maize | mitochondrion | 45.75 | 48.5 |
| HORVU4Hr1G089540.2 | Barley | cytosol | 39.62 | 48.0 |
| TraesCSU01G033600.1 | Wheat | cytosol | 39.62 | 48.0 |
| GSMUA_Achr5P12250_001 | Banana | cytosol | 41.98 | 47.85 |
| Zm00001d027330_P001 | Maize | extracellular, mitochondrion, plasma membrane | 41.04 | 47.54 |
| TraesCS4B01G393000.1 | Wheat | cytosol | 39.15 | 47.43 |
| Zm00001d017386_P001 | Maize | cytosol | 41.04 | 46.77 |
| AT5G23750.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 50.0 | 46.29 |
| Os04t0533300-02 | Rice | extracellular, plasma membrane | 44.81 | 45.45 |
| Os02t0642200-01 | Rice | plasma membrane | 43.4 | 45.32 |
| HORVU6Hr1G060700.5 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 38.68 | 42.93 |
| HORVU1Hr1G045920.1 | Barley | nucleus | 21.23 | 42.45 |
| PGSC0003DMT400026584 | Potato | nucleus | 38.21 | 42.41 |
| Solyc10g017540.2.1 | Tomato | nucleus | 36.79 | 41.27 |
| GSMUA_Achr5P10760_001 | Banana | cytosol | 49.06 | 38.81 |
| Os10t0503800-01 | Rice | nucleus | 23.58 | 37.59 |
| HORVU2Hr1G091680.3 | Barley | cytosol, plasma membrane | 44.81 | 31.67 |
| AT1G63295.2 | Thale cress | endoplasmic reticulum, nucleus, plastid | 25.0 | 27.75 |
| AT4G00670.1 | Thale cress | nucleus | 15.09 | 26.02 |
Protein Annotations
| MapMan:35.1 | EntrezGene:825298 | ProteinID:AEE80180.1 | EMBL:AF370346 | ArrayExpress:AT3G61260 | EnsemblPlantsGene:AT3G61260 |
| RefSeq:AT3G61260 | TAIR:AT3G61260 | RefSeq:AT3G61260-TAIR-G | EnsemblPlants:AT3G61260.1 | TAIR:AT3G61260.1 | EMBL:AY062977 |
| EMBL:AY088061 | ProteinID:CAB71056.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0016020 |
| RefSeq:NP_191685.1 | PFAM:PF03763 | PFAM:PF03766 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF2 | UniProt:Q9M2D8 | InterPro:Remorin_C |
| InterPro:Remorin_N | UniParc:UPI00000A274C | SEG:seg | : | : | : |
Description
Uncharacterized protein At3g61260 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2D8]
Coordinates
chr3:-:22675061..22676851
Molecular Weight (calculated)
23145.4 Da
IEP (calculated)
5.324
GRAVY (calculated)
-0.765
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQKIALE SESPAKVTTP APADTPAPAP AEIPAPAPAP TPADVTKDVA EEKIQNPPPE QIFDDSKALT VVEKPVEEPA PAKPASASLD RDVKLADLSK
101: EKRLSFVRAW EESEKSKAEN KAEKKIADVH AWENSKKAAV EAQLKKIEEQ LEKKKAEYAE RMKNKVAAIH KEAEERRAMI EAKRGEDVLK AEETAAKYRA
201: TGIVPKATCG CF
101: EKRLSFVRAW EESEKSKAEN KAEKKIADVH AWENSKKAAV EAQLKKIEEQ LEKKKAEYAE RMKNKVAAIH KEAEERRAMI EAKRGEDVLK AEETAAKYRA
201: TGIVPKATCG CF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.