Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007589.1-P | Field mustard | nucleus | 99.48 | 99.48 |
| CDX71754 | Canola | cytosol, mitochondrion, nucleus | 85.57 | 92.22 |
| CDY69344 | Canola | cytosol | 43.3 | 64.62 |
| PGSC0003DMT400055730 | Potato | cytosol | 17.01 | 63.46 |
| AT3G61260.1 | Thale cress | nucleus | 68.56 | 62.74 |
| CDY05883 | Canola | mitochondrion | 38.66 | 62.5 |
| CDY37068 | Canola | nucleus | 60.82 | 60.51 |
| CDY27356 | Canola | nucleus | 60.31 | 60.0 |
| CDY06318 | Canola | cytosol, nucleus, plastid | 59.79 | 59.49 |
| CDY18898 | Canola | cytosol | 58.76 | 59.38 |
| CDX74768 | Canola | nucleus | 58.76 | 59.38 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 55.15 | 58.47 |
| Zm00001d002842_P001 | Maize | extracellular, mitochondrion, plasma membrane | 57.73 | 56.28 |
| Solyc05g048820.2.1 | Tomato | nucleus, plastid | 44.33 | 56.21 |
| Solyc01g094370.2.1 | Tomato | plastid | 50.0 | 55.75 |
| CDY71834 | Canola | cytosol, mitochondrion, nucleus | 50.52 | 55.68 |
| KRH48177 | Soybean | plasma membrane | 56.7 | 55.56 |
| KRH40491 | Soybean | cytosol | 52.06 | 55.19 |
| EES12557 | Sorghum | cytosol | 60.31 | 55.19 |
| PGSC0003DMT400000462 | Potato | cytosol, mitochondrion, nucleus, plastid | 49.48 | 55.17 |
| VIT_15s0046g03180.t01 | Wine grape | nucleus | 55.67 | 55.1 |
| GSMUA_Achr1P03030_001 | Banana | nucleus | 53.09 | 54.21 |
| KRH65100 | Soybean | cytosol | 55.15 | 53.5 |
| TraesCS2A01G369800.1 | Wheat | nucleus | 57.22 | 52.86 |
| GSMUA_Achr1P00240_001 | Banana | nucleus | 51.55 | 52.08 |
| GSMUA_Achr4P25330_001 | Banana | nucleus | 47.42 | 51.69 |
| GSMUA_Achr11P... | Banana | nucleus | 52.06 | 51.53 |
| TraesCS2D01G366300.2 | Wheat | nucleus | 56.7 | 51.4 |
| CDX87157 | Canola | cytosol | 51.03 | 51.03 |
| Zm00001d025932_P003 | Maize | mitochondrion | 52.58 | 51.0 |
| TraesCS2B01G386900.1 | Wheat | nucleus | 56.19 | 50.93 |
| TraesCS6A01G237200.2 | Wheat | cytosol | 49.48 | 49.74 |
| TraesCS6B01G265700.2 | Wheat | cytosol | 48.97 | 49.74 |
| EER92997 | Sorghum | nucleus | 46.39 | 49.72 |
| Os03t0111200-01 | Rice | nucleus | 44.85 | 49.71 |
| GSMUA_Achr5P12250_001 | Banana | cytosol | 46.91 | 48.92 |
| TraesCS1D01G164300.1 | Wheat | nucleus | 44.33 | 48.59 |
| TraesCS1A01G174700.1 | Wheat | nucleus | 44.33 | 48.59 |
| TraesCS6D01G219800.1 | Wheat | cytosol | 47.42 | 48.17 |
| CDX88048 | Canola | nucleus | 50.0 | 47.32 |
| Zm00001d017386_P001 | Maize | cytosol | 45.36 | 47.31 |
| KXG31130 | Sorghum | cytosol | 47.42 | 46.94 |
| TraesCS5A01G554600.1 | Wheat | cytosol | 42.78 | 46.89 |
| TraesCS4B01G393000.1 | Wheat | cytosol | 42.27 | 46.86 |
| Zm00001d027330_P001 | Maize | extracellular, mitochondrion, plasma membrane | 43.81 | 46.45 |
| TraesCSU01G033600.1 | Wheat | cytosol | 41.75 | 46.29 |
| HORVU4Hr1G089540.2 | Barley | cytosol | 41.75 | 46.29 |
| HORVU6Hr1G060700.5 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 44.85 | 45.55 |
| EER93970 | Sorghum | nucleus | 36.08 | 45.16 |
| PGSC0003DMT400026584 | Potato | nucleus | 43.3 | 43.98 |
| Solyc10g017540.2.1 | Tomato | nucleus | 42.78 | 43.92 |
| Os02t0642200-01 | Rice | plasma membrane | 45.36 | 43.35 |
| Os04t0533300-02 | Rice | extracellular, plasma membrane | 46.39 | 43.06 |
| HORVU1Hr1G045920.1 | Barley | nucleus | 22.68 | 41.51 |
| Os10t0503800-01 | Rice | nucleus | 27.32 | 39.85 |
| GSMUA_Achr5P10760_001 | Banana | cytosol | 50.52 | 36.57 |
| HORVU2Hr1G091680.3 | Barley | cytosol, plasma membrane | 50.0 | 32.33 |
| CDY66598 | Canola | cytosol, nucleus, plastid | 17.01 | 31.73 |
| CDX91900 | Canola | cytosol, mitochondrion, nucleus | 18.56 | 27.27 |
| CDX74343 | Canola | nucleus | 18.04 | 26.52 |
Protein Annotations
| EnsemblPlants:CDY48933 | EnsemblPlantsGene:GSBRNA2T00092021001 | InterPro:Remorin_C | InterPro:Remorin_N | ncoils:Coil | PANTHER:PTHR31775 |
| PANTHER:PTHR31775:SF2 | PFAM:PF03763 | PFAM:PF03766 | ProteinID:CDY48933 | ProteinID:CDY48933.1 | SEG:seg |
| UniParc:UPI0004EEDD77 | UniProt:A0A078IIJ9 | MapMan:35.1 | : | : | : |
Description
BnaA09g39040DBnaA09g39040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIJ9]
Coordinates
chrLK032801:+:111638..112925
Molecular Weight (calculated)
20978.9 Da
IEP (calculated)
5.556
GRAVY (calculated)
-0.704
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQKITLD TAPPAPAETL ALAPAPAPAP AETPAPAPAP EKISDDSKAL AIVEKPVEPD APKKSSSSGS QDRDVKLADL SKEKTLAYVK AWEDSEKSKA
101: ENKAEKKISD ILAWENSKKA AVEAQLKKIE EQLENKKAEY AEKMKNKVAA IHKEAEERRA MIEAKRGEDV LKAEEMAAKF RATGIVPKAT CGCF
101: ENKAEKKISD ILAWENSKKA AVEAQLKKIE EQLENKKAEY AEKMKNKVAA IHKEAEERRA MIEAKRGEDV LKAEEMAAKF RATGIVPKAT CGCF
001: MAEEQKIALE SESPAKVTTP APADTPAPAP AEIPAPAPAP TPADVTKDVA EEKIQNPPPE QIFDDSKALT VVEKPVEEPA PAKPASASLD RDVKLADLSK
101: EKRLSFVRAW EESEKSKAEN KAEKKIADVH AWENSKKAAV EAQLKKIEEQ LEKKKAEYAE RMKNKVAAIH KEAEERRAMI EAKRGEDVLK AEETAAKYRA
201: TGIVPKATCG CF
101: EKRLSFVRAW EESEKSKAEN KAEKKIADVH AWENSKKAAV EAQLKKIEEQ LEKKKAEYAE RMKNKVAAIH KEAEERRAMI EAKRGEDVLK AEETAAKYRA
201: TGIVPKATCG CF
Arabidopsis Description
Uncharacterized protein At3g61260 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2D8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.