Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027633.1-P | Field mustard | cytosol | 64.42 | 41.61 |
| AT1G63295.2 | Thale cress | endoplasmic reticulum, nucleus, plastid | 53.85 | 29.32 |
| CDY69344 | Canola | cytosol | 32.69 | 26.15 |
| CDY71834 | Canola | cytosol, mitochondrion, nucleus | 37.5 | 22.16 |
| CDY05883 | Canola | mitochondrion | 24.04 | 20.83 |
| VIT_02s0025g03780.t01 | Wine grape | nucleus | 33.65 | 18.72 |
| CDX87157 | Canola | cytosol | 34.62 | 18.56 |
| CDX71754 | Canola | cytosol, mitochondrion, nucleus | 31.73 | 18.33 |
| GSMUA_Achr3P14410_001 | Banana | nucleus | 28.85 | 18.29 |
| CDX88048 | Canola | nucleus | 35.58 | 18.05 |
| CDY48933 | Canola | cytosol | 31.73 | 17.01 |
| CDY06318 | Canola | cytosol, nucleus, plastid | 31.73 | 16.92 |
| CDY37068 | Canola | nucleus | 31.73 | 16.92 |
| KRH77513 | Soybean | cytosol, nucleus, plastid | 30.77 | 16.75 |
| CDX74768 | Canola | nucleus | 30.77 | 16.67 |
| CDY18898 | Canola | cytosol | 30.77 | 16.67 |
| KRH41149 | Soybean | extracellular | 30.77 | 16.49 |
| KRH59848 | Soybean | extracellular | 28.85 | 16.39 |
| GSMUA_Achr11P... | Banana | cytosol | 26.92 | 16.28 |
| KRH27955 | Soybean | nucleus | 32.69 | 15.81 |
| CDY27356 | Canola | nucleus | 28.85 | 15.38 |
| PGSC0003DMT400007918 | Potato | cytosol | 27.88 | 15.26 |
| CDX74343 | Canola | nucleus | 12.5 | 9.85 |
| CDX91900 | Canola | cytosol, mitochondrion, nucleus | 11.54 | 9.09 |
Protein Annotations
| EnsemblPlants:CDY66598 | EnsemblPlantsGene:GSBRNA2T00054623001 | InterPro:Remorin_C | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | PFAM:PF03763 |
| ProteinID:CDY66598 | ProteinID:CDY66598.1 | UniParc:UPI0004EE288D | UniProt:A0A078JG52 | MapMan:35.2 | : |
Description
BnaA09g53010DBnaA09g53010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JG52]
Coordinates
chrLK035351:+:15561..16192
Molecular Weight (calculated)
12067.2 Da
IEP (calculated)
5.219
GRAVY (calculated)
-0.813
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQAKQAKND SPLHEQCTTI SSSNQNENFV EIEKEKTIAL INAWEENEKA KAQTKAYKEL CSIEAWENNM KTSLELDLKK MEVYYYIVSI HDEKQNHKNL
101: CISI
101: CISI
001: MPFQSFELLV STNCSFYFYF SVKISQKYKG RRTDEKRNPN MHMGQNKPVQ KKSPLYEEST IIFASSQNEK LVEIEKEKRL ALIDAWEENE KAKAQTKAYK
101: ELCSIESWEN NMKTALELDL KKMEENLQVE KTEFSKKFKK KIPEIEKIAE AKREKIEKQK EQESIKVEKI SEKLIATPNA YPPNTKTCGC F
101: ELCSIESWEN NMKTALELDL KKMEENLQVE KTEFSKKFKK KIPEIEKIAE AKREKIEKQK EQESIKVEKI SEKLIATPNA YPPNTKTCGC F
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT1G63295]
SUBAcon: [endoplasmic reticulum,plastid,nucleus]
SUBAcon: [endoplasmic reticulum,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.