Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 1
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27955 | Soybean | nucleus | 63.35 | 56.28 |
| KRH35326 | Soybean | nucleus | 48.69 | 47.94 |
| KRG91502 | Soybean | nucleus | 48.17 | 46.7 |
| KRH65100 | Soybean | cytosol | 48.69 | 46.5 |
| VIT_02s0025g03780.t01 | Wine grape | nucleus | 44.5 | 45.45 |
| KRH48177 | Soybean | plasma membrane | 47.12 | 45.45 |
| KRH41149 | Soybean | extracellular | 46.07 | 45.36 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 43.46 | 45.36 |
| KRH59848 | Soybean | extracellular | 43.46 | 45.36 |
| GSMUA_Achr3P14410_001 | Banana | nucleus | 38.74 | 45.12 |
| KRH40491 | Soybean | cytosol | 42.41 | 44.26 |
| PGSC0003DMT400007918 | Potato | cytosol | 43.46 | 43.68 |
| KRH38487 | Soybean | nucleus | 46.6 | 43.2 |
| KRH09020 | Soybean | nucleus | 46.07 | 42.93 |
| GSMUA_Achr11P... | Banana | cytosol | 32.46 | 36.05 |
| Bra027633.1-P | Field mustard | cytosol | 26.18 | 31.06 |
| CDY66598 | Canola | cytosol, nucleus, plastid | 16.75 | 30.77 |
| AT1G63295.2 | Thale cress | endoplasmic reticulum, nucleus, plastid | 28.8 | 28.8 |
Protein Annotations
| EMBL:ACUP02000674 | EnsemblPlants:KRH77513 | EnsemblPlantsGene:GLYMA_01G218000 | EntrezGene:100815301 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | PFAM:PF03763 | ProteinID:KRH77513 | ProteinID:KRH77513.1 | SEG:seg |
| UniParc:UPI0002336B73 | UniProt:K7K561 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:54802662..54805104
Molecular Weight (calculated)
21687.4 Da
IEP (calculated)
5.523
GRAVY (calculated)
-0.964
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEVSSKTE PELHCVDSVP EEHNSSVQEK ELEKPEPPND KVTPPSPAAA QEVADHASKK DTEESLDKDA MLARVVTEKR LALVKAWEES EKTKAENRAY
101: KRLSAVGFWE DSKKASVEAQ LKKIEENLEK KKAEYVEKMK NKVAKIHLLA EEKRAVVEAQ KREEFIDLEE TASKFRSRGD TPRRFFACFS G
101: KRLSAVGFWE DSKKASVEAQ LKKIEENLEK KKAEYVEKMK NKVAKIHLLA EEKRAVVEAQ KREEFIDLEE TASKFRSRGD TPRRFFACFS G
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKEV EEEKKEGSVN RDAVLARVET EKRMSLIKAW
101: EEAEKCKVEN KAEKKLSSIG SWENNKKAAV EAELKKMEEQ LEKKKAEYVE QMKNKIAQIH KEAEEKRAMI EAKRGEEILK AEELAAKYRA TGTAPKKLFG
201: CM
101: EEAEKCKVEN KAEKKLSSIG SWENNKKAAV EAELKKMEEQ LEKKKAEYVE QMKNKIAQIH KEAEEKRAMI EAKRGEEILK AEELAAKYRA TGTAPKKLFG
201: CM
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.