Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
25724908
|
msms PMID:
25724908
doi
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41149 | Soybean | extracellular | 87.43 | 82.47 |
| KRH77513 | Soybean | cytosol, nucleus, plastid | 45.36 | 43.46 |
| VIT_02s0025g03780.t01 | Wine grape | nucleus | 44.26 | 43.32 |
| KRH35326 | Soybean | nucleus | 43.72 | 41.24 |
| PGSC0003DMT400007918 | Potato | cytosol | 42.08 | 40.53 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 40.44 | 40.44 |
| GSMUA_Achr3P14410_001 | Banana | nucleus | 36.07 | 40.24 |
| KRH40491 | Soybean | cytosol | 39.89 | 39.89 |
| KRH27955 | Soybean | nucleus | 45.9 | 39.07 |
| KRH09020 | Soybean | nucleus | 43.72 | 39.02 |
| KRG91502 | Soybean | nucleus | 41.53 | 38.58 |
| KRH48177 | Soybean | plasma membrane | 40.98 | 37.88 |
| KRH38487 | Soybean | nucleus | 42.62 | 37.86 |
| KRH65100 | Soybean | cytosol | 40.44 | 37.0 |
| GSMUA_Achr11P... | Banana | cytosol | 34.43 | 36.63 |
| Bra027633.1-P | Field mustard | cytosol | 26.23 | 29.81 |
| CDY66598 | Canola | cytosol, nucleus, plastid | 16.39 | 28.85 |
| AT1G63295.2 | Thale cress | endoplasmic reticulum, nucleus, plastid | 28.96 | 27.75 |
Protein Annotations
| EMBL:ACUP02003342 | EnsemblPlants:KRH59848 | EnsemblPlantsGene:GLYMA_05G205900 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31775 |
| PANTHER:PTHR31775:SF5 | PFAM:PF03763 | ProteinID:KRH59848 | ProteinID:KRH59848.1 | SEG:seg | UniParc:UPI00029619D4 |
| UniProt:K7KS41 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:38872433..38876323
Molecular Weight (calculated)
21113.3 Da
IEP (calculated)
10.292
GRAVY (calculated)
-0.891
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESGNQRGK EVEDGDTSSG VRQEYAISPL NLCLFAIRNQ FRSFLVILSK KVKKKVLTTR TGSKESVDRE KRLALIRAWE ESEKTKAENR AYKRHNAVVL
101: WENSKKASAE AHLKRIEEKL DRNKAKCVEK MQNKVAEIHR TAEEKRAMIE AYKGEEFLEI EEKAAKFRTR GYSPKKYLPC FGS
101: WENSKKASAE AHLKRIEEKL DRNKAKCVEK MQNKVAEIHR TAEEKRAMIE AYKGEEFLEI EEKAAKFRTR GYSPKKYLPC FGS
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.