Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- cytosol 2
- plasma membrane 1
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P14410_001 | Banana | nucleus | 44.77 | 46.95 |
| GSMUA_Achr7P04410_001 | Banana | plasma membrane | 45.93 | 46.2 |
| GSMUA_Achr11P... | Banana | nucleus | 46.51 | 40.82 |
| GSMUA_Achr1P00240_001 | Banana | nucleus | 44.19 | 39.58 |
| GSMUA_Achr4P25330_001 | Banana | nucleus | 40.12 | 38.76 |
| GSMUA_Achr1P03030_001 | Banana | nucleus | 42.44 | 38.42 |
| PGSC0003DMT400007918 | Potato | cytosol | 41.86 | 37.89 |
| GSMUA_Achr5P12250_001 | Banana | cytosol | 40.7 | 37.63 |
| VIT_02s0025g03780.t01 | Wine grape | nucleus | 40.12 | 36.9 |
| KRH41149 | Soybean | extracellular | 38.95 | 34.54 |
| KRH59848 | Soybean | extracellular | 36.63 | 34.43 |
| KRH77513 | Soybean | cytosol, nucleus, plastid | 36.05 | 32.46 |
| KRH27955 | Soybean | nucleus | 36.63 | 29.3 |
| GSMUA_Achr5P10760_001 | Banana | cytosol | 45.35 | 29.1 |
| CDY66598 | Canola | cytosol, nucleus, plastid | 16.28 | 26.92 |
| Bra027633.1-P | Field mustard | cytosol | 22.67 | 24.22 |
| AT1G63295.2 | Thale cress | endoplasmic reticulum, nucleus, plastid | 26.16 | 23.56 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P07550_001 | EnsemblPlants:GSMUA_Achr11T07550_001 | EnsemblPlantsGene:GSMUA_Achr11G07550_001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31775 |
| PANTHER:PTHR31775:SF5 | PFAM:PF03763 | SEG:seg | UniParc:UPI000294BDE5 | UniProt:M0RQ85 | MapMan:35.1 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G07550_001]
Coordinates
chr11:-:5887956..5890929
Molecular Weight (calculated)
19354.9 Da
IEP (calculated)
8.695
GRAVY (calculated)
-0.677
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVRIHRRMV EVNADSPFVS FFTDHELDLW SLGGFSYAFA SYGGCADALL AQVENDKRIS LIRAWSAGEK TKADNKAQRK MSSILSWENT KMATIEAEIK
101: KNEERLEKKK ADSEEKAKNK IAMIHKEAEE RRAMVESKHG EELLRAEEAV AKYHSTGHTP KKGAGCFSSF SP
101: KNEERLEKKK ADSEEKAKNK IAMIHKEAEE RRAMVESKHG EELLRAEEAV AKYHSTGHTP KKGAGCFSSF SP
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKEV EEEKKEGSVN RDAVLARVET EKRMSLIKAW
101: EEAEKCKVEN KAEKKLSSIG SWENNKKAAV EAELKKMEEQ LEKKKAEYVE QMKNKIAQIH KEAEEKRAMI EAKRGEEILK AEELAAKYRA TGTAPKKLFG
201: CM
101: EEAEKCKVEN KAEKKLSSIG SWENNKKAAV EAELKKMEEQ LEKKKAEYVE QMKNKIAQIH KEAEEKRAMI EAKRGEEILK AEELAAKYRA TGTAPKKLFG
201: CM
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.