Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 1
- plasma membrane 1
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055730 | Potato | cytosol | 18.88 | 71.15 |
| GSMUA_Achr7P04410_001 | Banana | plasma membrane | 59.18 | 67.84 |
| GSMUA_Achr1P00240_001 | Banana | nucleus | 60.71 | 61.98 |
| GSMUA_Achr1P03030_001 | Banana | nucleus | 59.69 | 61.58 |
| Zm00001d002842_P001 | Maize | extracellular, mitochondrion, plasma membrane | 62.24 | 61.31 |
| GSMUA_Achr3P14410_001 | Banana | nucleus | 48.47 | 57.93 |
| TraesCS1A01G174700.1 | Wheat | nucleus | 52.04 | 57.63 |
| TraesCS1D01G164300.1 | Wheat | nucleus | 52.04 | 57.63 |
| GSMUA_Achr5P12250_001 | Banana | cytosol | 54.59 | 57.53 |
| GSMUA_Achr4P25330_001 | Banana | nucleus | 52.04 | 57.3 |
| EES12557 | Sorghum | cytosol | 61.73 | 57.08 |
| Bra004940.1-P | Field mustard | nucleus | 55.61 | 56.77 |
| CDX74768 | Canola | nucleus | 55.61 | 56.77 |
| VIT_15s0046g03180.t01 | Wine grape | nucleus | 56.63 | 56.63 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 52.55 | 56.28 |
| CDY18898 | Canola | cytosol | 55.1 | 56.25 |
| CDX71754 | Canola | cytosol, mitochondrion, nucleus | 51.53 | 56.11 |
| CDY37068 | Canola | nucleus | 55.61 | 55.9 |
| CDY27356 | Canola | nucleus | 55.61 | 55.9 |
| CDY06318 | Canola | cytosol, nucleus, plastid | 55.61 | 55.9 |
| EER92997 | Sorghum | nucleus | 51.53 | 55.8 |
| AT2G45820.1 | Thale cress | cytosol | 54.08 | 55.79 |
| Bra039311.1-P | Field mustard | cytosol, nucleus, plastid | 55.1 | 55.38 |
| Os03t0111200-01 | Rice | nucleus | 48.98 | 54.86 |
| TraesCS2A01G369800.1 | Wheat | nucleus | 58.16 | 54.29 |
| PGSC0003DMT400000462 | Potato | cytosol, mitochondrion, nucleus, plastid | 47.96 | 54.02 |
| TraesCS6D01G219800.1 | Wheat | cytosol | 52.55 | 53.93 |
| TraesCS6B01G265700.2 | Wheat | cytosol | 52.55 | 53.93 |
| TraesCS6A01G237200.2 | Wheat | cytosol | 53.06 | 53.89 |
| TraesCS2D01G366300.2 | Wheat | nucleus | 58.67 | 53.74 |
| TraesCS2B01G386900.1 | Wheat | nucleus | 58.16 | 53.27 |
| Solyc05g048820.2.1 | Tomato | nucleus, plastid | 41.33 | 52.94 |
| Solyc01g094370.2.1 | Tomato | plastid | 46.94 | 52.87 |
| TraesCSU01G033600.1 | Wheat | cytosol | 46.94 | 52.57 |
| TraesCS5A01G554600.1 | Wheat | cytosol | 47.45 | 52.54 |
| KRH48177 | Soybean | plasma membrane | 53.06 | 52.53 |
| Zm00001d025932_P003 | Maize | mitochondrion | 53.57 | 52.5 |
| Bra007589.1-P | Field mustard | nucleus | 51.53 | 52.06 |
| CDY48933 | Canola | cytosol | 51.53 | 52.06 |
| TraesCS4B01G393000.1 | Wheat | cytosol | 46.43 | 52.0 |
| HORVU4Hr1G089540.2 | Barley | cytosol | 46.43 | 52.0 |
| Zm00001d027330_P001 | Maize | extracellular, mitochondrion, plasma membrane | 48.47 | 51.91 |
| KRH40491 | Soybean | cytosol | 47.96 | 51.37 |
| KRH65100 | Soybean | cytosol | 52.04 | 51.0 |
| KXG31130 | Sorghum | cytosol | 50.0 | 50.0 |
| AT3G61260.1 | Thale cress | nucleus | 54.08 | 50.0 |
| Zm00001d017386_P001 | Maize | cytosol | 46.94 | 49.46 |
| HORVU6Hr1G060700.5 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 47.96 | 49.21 |
| EER93970 | Sorghum | nucleus | 38.27 | 48.39 |
| Os04t0533300-02 | Rice | extracellular, plasma membrane | 51.02 | 47.85 |
| Os02t0642200-01 | Rice | plasma membrane | 48.47 | 46.8 |
| GSMUA_Achr11P... | Banana | cytosol | 40.82 | 46.51 |
| HORVU1Hr1G045920.1 | Barley | nucleus | 23.98 | 44.34 |
| PGSC0003DMT400026584 | Potato | nucleus | 41.84 | 42.93 |
| Solyc10g017540.2.1 | Tomato | nucleus | 41.33 | 42.86 |
| Os10t0503800-01 | Rice | nucleus | 29.08 | 42.86 |
| GSMUA_Achr5P10760_001 | Banana | cytosol | 56.12 | 41.04 |
| HORVU2Hr1G091680.3 | Barley | cytosol, plasma membrane | 53.57 | 35.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P04080_001 | EnsemblPlants:GSMUA_Achr11T04080_001 | EnsemblPlantsGene:GSMUA_Achr11G04080_001 | InterPro:Remorin_C | InterPro:Remorin_N | ncoils:Coil |
| PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | PFAM:PF03763 | PFAM:PF03766 | SEG:seg | UniParc:UPI000295DF80 |
| UniProt:M0RP88 | MapMan:35.1 | : | : | : | : |
Description
Remorin [Source:GMGC_GENE;Acc:GSMUA_Achr11G04080_001]
Coordinates
chr11:+:2992016..2993879
Molecular Weight (calculated)
21506.7 Da
IEP (calculated)
6.584
GRAVY (calculated)
-0.834
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEESTKME VEGVAGTAAH PPPAETVKDL AKDKSAVPPP EEEEKPDDSK ALATVDTTEA AATKKTSGGS IDRDAVLARV ETEKRESMIK AWEENEKTKA
101: QNKAAKKMAS ITAWENSKKA ALEAELKMKE EALEKKKAEY VEKMKNKIAM LHKAAEEKKA MVEAKRGEEF LKAEEMAAKY RVTGFTPKKL FGCFGA
101: QNKAAKKMAS ITAWENSKKA ALEAELKMKE EALEKKKAEY VEKMKNKIAM LHKAAEEKKA MVEAKRGEEF LKAEEMAAKY RVTGFTPKKL FGCFGA
001: MTTRNRTSLP NISSSVSSNK NIVVPNIMAE EEPKKVTETV SEPTPTPEVP VEKPAAAADV APQEKPVAPP PVLPSPAPAE EKQEDSKAIV PVVPKEVEEE
101: KKEGSVNRDA VLARVETEKR MSLIKAWEEA EKCKVENKAE KKLSSIGSWE NNKKAAVEAE LKKMEEQLEK KKAEYVEQMK NKIAQIHKEA EEKRAMIEAK
201: RGEEILKAEE LAAKYRATGT APKKLFGCM
101: KKEGSVNRDA VLARVETEKR MSLIKAWEEA EKCKVENKAE KKLSSIGSWE NNKKAAVEAE LKKMEEQLEK KKAEYVEQMK NKIAQIHKEA EEKRAMIEAK
201: RGEEILKAEE LAAKYRATGT APKKLFGCM
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.