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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plasma membrane 2
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr1P00240_001
GSMUA_Achr1P03030_001
GSMUA_Achr4P25330_001
GSMUA_Achr5P10760_001
GSMUA_Achr5P12250_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G45820.1 GSMUA_Achr11P... AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr1P00240_001 AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr1P03030_001 AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr4P25330_001 AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr5P10760_001 AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr5P12250_001 AT2G45820.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P03030_001 Banana nucleus 52.99 74.74
GSMUA_Achr4P25330_001 Banana nucleus 47.01 70.79
GSMUA_Achr1P00240_001 Banana nucleus 44.4 61.98
GSMUA_Achr7P04410_001 Banana plasma membrane 38.06 59.65
PGSC0003DMT400055730 Potato cytosol 11.57 59.62
GSMUA_Achr5P12250_001 Banana cytosol 39.18 56.45
GSMUA_Achr11P... Banana nucleus 41.04 56.12
Zm00001d002842_P001 Maize extracellular, mitochondrion, plasma membrane 40.67 54.77
KRH00705 Soybean cytosol, nucleus, plastid 36.94 54.1
Os03t0111200-01 Rice nucleus 35.07 53.71
TraesCS1A01G174700.1 Wheat nucleus 35.45 53.67
TraesCS1D01G164300.1 Wheat nucleus 35.45 53.67
Zm00001d025932_P003 Maize mitochondrion 39.55 53.0
EES12557 Sorghum cytosol 41.79 52.83
CDX71754 Canola cytosol, mitochondrion, nucleus 35.45 52.78
TraesCS2A01G369800.1 Wheat nucleus 40.67 51.9
GSMUA_Achr3P14410_001 Banana nucleus 31.72 51.83
KRH40491 Soybean cytosol 35.07 51.37
CDY27356 Canola nucleus 37.31 51.28
Bra004940.1-P Field mustard nucleus 36.57 51.04
CDX74768 Canola nucleus 36.57 51.04
Bra039311.1-P Field mustard cytosol, nucleus, plastid 36.94 50.77
CDY37068 Canola nucleus 36.94 50.77
CDY18898 Canola cytosol 36.19 50.52
Bra007589.1-P Field mustard nucleus 36.57 50.52
CDY48933 Canola cytosol 36.57 50.52
TraesCS2B01G386900.1 Wheat nucleus 40.3 50.47
TraesCS2D01G366300.2 Wheat nucleus 40.3 50.47
EER93970 Sorghum nucleus 29.1 50.32
TraesCS4B01G393000.1 Wheat cytosol 32.84 50.29
TraesCSU01G033600.1 Wheat cytosol 32.84 50.29
HORVU4Hr1G089540.2 Barley cytosol 32.84 50.29
TraesCS6D01G219800.1 Wheat cytosol 35.82 50.26
CDY06318 Canola cytosol, nucleus, plastid 36.57 50.26
KRH48177 Soybean plasma membrane 36.94 50.0
TraesCS6B01G265700.2 Wheat cytosol 35.45 49.74
EER92997 Sorghum nucleus 33.58 49.72
TraesCS5A01G554600.1 Wheat cytosol 32.84 49.72
VIT_15s0046g03180.t01 Wine grape nucleus 36.19 49.49
Zm00001d017386_P001 Maize cytosol 34.33 49.46
AT3G61260.1 Thale cress nucleus 38.81 49.06
Solyc05g048820.2.1 Tomato nucleus, plastid 27.99 49.02
AT2G45820.1 Thale cress cytosol 34.7 48.95
TraesCS6A01G237200.2 Wheat cytosol 35.07 48.7
KXG31130 Sorghum cytosol 35.45 48.47
KRH65100 Soybean cytosol 35.45 47.5
Solyc01g094370.2.1 Tomato plastid 30.6 47.13
Os02t0642200-01 Rice plasma membrane 35.45 46.8
PGSC0003DMT400000462 Potato cytosol, mitochondrion, nucleus, plastid 30.22 46.55
Zm00001d027330_P001 Maize extracellular, mitochondrion, plasma membrane 31.72 46.45
HORVU6Hr1G060700.5 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 32.84 46.07
Os04t0533300-02 Rice extracellular, plasma membrane 35.45 45.45
GSMUA_Achr11P... Banana cytosol 29.1 45.35
HORVU1Hr1G045920.1 Barley nucleus 17.16 43.4
Solyc10g017540.2.1 Tomato nucleus 27.99 39.68
PGSC0003DMT400026584 Potato nucleus 27.61 38.74
Os10t0503800-01 Rice nucleus 19.03 38.35
HORVU2Hr1G091680.3 Barley cytosol, plasma membrane 36.19 32.33
Protein Annotations
Gene3D:3.30.70.100MapMan:35.2ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0006810
GO:GO:0008150GO:GO:0030001GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr5G10760_001EnsemblPlants:GSMUA_Achr5P10760_001EnsemblPlants:GSMUA_Achr5T10760_001
InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121UniProt:M0SXF5PFAM:PF00403PFAM:PF03763
PFAM:PF03766PANTHER:PTHR31775PANTHER:PTHR31775:SF5InterPro:Remorin_CInterPro:Remorin_NSUPFAM:SSF55008
UniParc:UPI000295998FSEG:seg::::
Description
Remorin [Source:GMGC_GENE;Acc:GSMUA_Achr5G10760_001]
Coordinates
chr5:+:7698735..7703883
Molecular Weight (calculated)
30111.0 Da
IEP (calculated)
6.570
GRAVY (calculated)
-0.691
Length
268 amino acids
Sequence
(BLAST)
001: MFKQQKVVFT VSSLVDVKSK QRVMEAVADI HGVDTIAADF KEQKLTITGE MDIIAIAKRL KKFGKFEVAS VETGEEKKEQ NEGKKYWWEM AEEKPAARVE
101: VEAEGASVVK DVEEEKTAIV PASEEKPDDS KALAIVEQVV EPSANDRDTA LARVATEKRL SLIKAWEENE KVKAENKALK KMSSISAWEN SKKAEVEAEL
201: KKKEEELEKK KAEHAEKVKN KIALIHKEAE EKRAIAEAKH GEEALKAEEK AAKYRATGLT PKRIFGFF
Best Arabidopsis Sequence Match ( AT3G48940.1 )
(BLAST)
001: MTLEEQKKVI MPEAVASEPS PPSKEEKSDD SKAIVLVVAA KEPTEDKKVG SVHRDAVLVR LEQDKRISLI KAWEEAEKSK VENKAQKKIS SVGAWENSKK
101: ASVEAELKKI EEQLNKKKAH YTEQMKNKIA QIHKEAEEKR AMTEAKRGED VLKAEEMAAK YRATGTAPTK LFGFF
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.