Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G45820.1 | EER92997 | AT2G45820.1 | 21798944 |
| AT2G45820.1 | EER93970 | AT2G45820.1 | 21798944 |
| AT2G45820.1 | EES12557 | AT2G45820.1 | 21798944 |
| AT2G45820.1 | KXG31130 | AT2G45820.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017386_P001 | Maize | cytosol | 70.92 | 74.73 |
| TraesCS6D01G219800.1 | Wheat | cytosol | 64.29 | 65.97 |
| TraesCS6A01G237200.2 | Wheat | cytosol | 64.8 | 65.8 |
| TraesCS6B01G265700.2 | Wheat | cytosol | 63.78 | 65.44 |
| PGSC0003DMT400055730 | Potato | cytosol | 16.33 | 61.54 |
| EES12557 | Sorghum | cytosol | 65.82 | 60.85 |
| GSMUA_Achr1P00240_001 | Banana | nucleus | 59.18 | 60.42 |
| Os02t0642200-01 | Rice | plasma membrane | 62.24 | 60.1 |
| HORVU6Hr1G060700.5 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 55.61 | 57.07 |
| GSMUA_Achr5P12250_001 | Banana | cytosol | 50.51 | 53.23 |
| Bra004940.1-P | Field mustard | nucleus | 51.53 | 52.6 |
| CDX74768 | Canola | nucleus | 51.53 | 52.6 |
| Solyc01g094370.2.1 | Tomato | plastid | 46.43 | 52.3 |
| GSMUA_Achr1P03030_001 | Banana | nucleus | 50.51 | 52.11 |
| KRH48177 | Soybean | plasma membrane | 52.55 | 52.02 |
| CDY18898 | Canola | cytosol | 50.51 | 51.56 |
| EER92997 | Sorghum | nucleus | 47.45 | 51.38 |
| PGSC0003DMT400000462 | Potato | cytosol, mitochondrion, nucleus, plastid | 45.41 | 51.15 |
| VIT_15s0046g03180.t01 | Wine grape | nucleus | 51.02 | 51.02 |
| CDY06318 | Canola | cytosol, nucleus, plastid | 50.51 | 50.77 |
| Bra039311.1-P | Field mustard | cytosol, nucleus, plastid | 50.51 | 50.77 |
| CDY27356 | Canola | nucleus | 50.51 | 50.77 |
| CDY37068 | Canola | nucleus | 50.51 | 50.77 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 46.94 | 50.27 |
| KRH40491 | Soybean | cytosol | 46.94 | 50.27 |
| GSMUA_Achr11P... | Banana | nucleus | 50.0 | 50.0 |
| AT2G45820.1 | Thale cress | cytosol | 48.47 | 50.0 |
| KRH65100 | Soybean | cytosol | 49.49 | 48.5 |
| CDX71754 | Canola | cytosol, mitochondrion, nucleus | 44.39 | 48.33 |
| CDY48933 | Canola | cytosol | 46.94 | 47.42 |
| Bra007589.1-P | Field mustard | nucleus | 46.94 | 47.42 |
| AT3G61260.1 | Thale cress | nucleus | 51.02 | 47.17 |
| Solyc05g048820.2.1 | Tomato | nucleus, plastid | 36.73 | 47.06 |
| EER93970 | Sorghum | nucleus | 36.73 | 46.45 |
| GSMUA_Achr4P25330_001 | Banana | nucleus | 41.84 | 46.07 |
| PGSC0003DMT400026584 | Potato | nucleus | 39.8 | 40.84 |
| Solyc10g017540.2.1 | Tomato | nucleus | 39.29 | 40.74 |
| GSMUA_Achr5P10760_001 | Banana | cytosol | 48.47 | 35.45 |
| OQU85995 | Sorghum | cytosol | 32.14 | 31.82 |
Protein Annotations
| EnsemblPlants:KXG31130 | EnsemblPlantsGene:SORBI_3004G303300 | InterPro:Remorin_C | InterPro:Remorin_N | ncoils:Coil | PANTHER:PTHR31775 |
| PANTHER:PTHR31775:SF13 | PFAM:PF03763 | PFAM:PF03766 | ProteinID:KXG31130 | ProteinID:KXG31130.1 | SEG:seg |
| UniParc:UPI0007F2EC31 | UniProt:A0A194YTH2 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:64198058..64206376
Molecular Weight (calculated)
21192.4 Da
IEP (calculated)
9.587
GRAVY (calculated)
-0.618
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEGPKKAE AEAEAAAETV ATAKAVAAEE EAVVPAPGPP AGDSNSKALV VVVDKVADKP CAVNNTPRNS NDRDIALAKV EIEKRNSLIK AWEENEKSKA
101: ENKVAKKQSV ILSWENTKKA VIEAQLKKKE EQLEKKKAEY GEKMKNKKAV IHRQAEEKRA MVIAQCGEEV LKAEEVAAKY RAKGVAPKKF LGCFGA
101: ENKVAKKQSV ILSWENTKKA VIEAQLKKKE EQLEKKKAEY GEKMKNKKAV IHRQAEEKRA MVIAQCGEEV LKAEEVAAKY RAKGVAPKKF LGCFGA
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.