Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0824500-01 | Rice | cytosol | 45.45 | 50.28 |
| TraesCS6D01G387000.1 | Wheat | cytosol, mitochondrion, nucleus | 39.9 | 47.02 |
| TraesCS6B01G447400.1 | Wheat | cytosol, mitochondrion, nucleus | 38.38 | 43.93 |
| TraesCS6A01G403500.1 | Wheat | nucleus | 37.88 | 43.86 |
| HORVU0Hr1G017760.1 | Barley | nucleus | 39.9 | 43.17 |
| EES12557 | Sorghum | cytosol | 35.35 | 33.02 |
| EER93970 | Sorghum | nucleus | 25.25 | 32.26 |
| KXG31130 | Sorghum | cytosol | 31.82 | 32.14 |
| EER92997 | Sorghum | nucleus | 28.28 | 30.94 |
| AT4G00670.1 | Thale cress | nucleus | 15.66 | 25.2 |
| CDX74343 | Canola | nucleus | 14.65 | 21.97 |
| CDX91900 | Canola | cytosol, mitochondrion, nucleus | 14.65 | 21.97 |
| Bra000964.1-P | Field mustard | cytosol, mitochondrion, nucleus | 14.14 | 21.21 |
Protein Annotations
| EnsemblPlants:OQU85995 | EnsemblPlantsGene:SORBI_3004G352301 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF3 |
| PFAM:PF03763 | ProteinID:OQU85995 | ProteinID:OQU85995.1 | SEG:seg | UniParc:UPI000B8BA981 | UniProt:A0A1Z5RRD5 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:68097411..68098526
Molecular Weight (calculated)
21874.9 Da
IEP (calculated)
9.553
GRAVY (calculated)
-0.266
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKEEAMMM VAAPAAGAGE AKNGPPVAVD KAGAAPADRA DAAVLAKVEM DRKLSMIKAW EESEKSKAQN KYRRAEKKML SAIMAWEKTK KAAEKLEKKK
101: AEYAEKMRNQ AAGIHKAAEE KRASVEATRR EAILKYEDMA VYIHPYIHTP TTTYIAFVPQ KSLAIAFLCA LLGRYCLLKG IACNAYPLCA LCSMVYYM
101: AEYAEKMRNQ AAGIHKAAEE KRASVEATRR EAILKYEDMA VYIHPYIHTP TTTYIAFVPQ KSLAIAFLCA LLGRYCLLKG IACNAYPLCA LCSMVYYM
001: MTLEEQKKVI MPEAVASEPS PPSKEEKSDD SKAIVLVVAA KEPTEDKKVG SVHRDAVLVR LEQDKRISLI KAWEEAEKSK VENKAQKKIS SVGAWENSKK
101: ASVEAELKKI EEQLNKKKAH YTEQMKNKIA QIHKEAEEKR AMTEAKRGED VLKAEEMAAK YRATGTAPTK LFGFF
101: ASVEAELKKI EEQLNKKKAH YTEQMKNKIA QIHKEAEEKR AMTEAKRGED VLKAEEMAAK YRATGTAPTK LFGFF
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.