Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G447400.1 | Wheat | cytosol, mitochondrion, nucleus | 86.55 | 85.55 |
| TraesCS6D01G387000.1 | Wheat | cytosol, mitochondrion, nucleus | 82.46 | 83.93 |
| HORVU0Hr1G017760.1 | Barley | nucleus | 80.12 | 74.86 |
| Os02t0824500-01 | Rice | cytosol | 61.4 | 58.66 |
| TraesCS6A01G237200.2 | Wheat | cytosol | 45.61 | 40.41 |
| TraesCS2A01G369800.1 | Wheat | nucleus | 47.37 | 38.57 |
| OQU85995 | Sorghum | cytosol | 43.86 | 37.88 |
| TraesCS1A01G174700.1 | Wheat | nucleus | 38.6 | 37.29 |
| TraesCS5A01G554600.1 | Wheat | cytosol | 37.43 | 36.16 |
| AT4G00670.1 | Thale cress | nucleus | 19.3 | 26.83 |
| Bra000964.1-P | Field mustard | cytosol, mitochondrion, nucleus | 17.54 | 22.73 |
| CDX74343 | Canola | nucleus | 16.96 | 21.97 |
| CDX91900 | Canola | cytosol, mitochondrion, nucleus | 16.37 | 21.21 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G403500.1 | EnsemblPlantsGene:TraesCS6A01G403500 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF3 |
| PFAM:PF03763 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:610857311..610858422
Molecular Weight (calculated)
18858.5 Da
IEP (calculated)
10.152
GRAVY (calculated)
-0.932
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: METQQEPTKA GAVVASPGVA GGGGLVLENE PPAPTTAQQG PPGSATDRDA VLAKVEMNRK LSMVKAWEEN QKSKADNRAE HKMSSILSWE NTKKAAVQAK
101: LRTREEKLER KKAEYAEKMR NRAAMIHKEA EEQRAAVEAR RQEEMIKCQE TAAKHRSQGT TPAKKFLTCF G
101: LRTREEKLER KKAEYAEKMR NRAAMIHKEA EEQRAAVEAR RQEEMIKCQE TAAKHRSQGT TPAKKFLTCF G
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.