Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G387000.1 | Wheat | cytosol, mitochondrion, nucleus | 59.78 | 63.69 |
| TraesCS6A01G403500.1 | Wheat | nucleus | 58.66 | 61.4 |
| TraesCS6B01G447400.1 | Wheat | cytosol, mitochondrion, nucleus | 58.66 | 60.69 |
| HORVU0Hr1G017760.1 | Barley | nucleus | 59.78 | 58.47 |
| OQU85995 | Sorghum | cytosol | 50.28 | 45.45 |
| Os03t0111200-01 | Rice | nucleus | 41.9 | 42.86 |
| Os02t0642200-01 | Rice | plasma membrane | 47.49 | 41.87 |
| Os04t0533300-02 | Rice | extracellular, plasma membrane | 46.93 | 40.19 |
| AT4G00670.1 | Thale cress | nucleus | 22.35 | 32.52 |
| Os10t0503800-01 | Rice | nucleus | 24.02 | 32.33 |
| Bra000964.1-P | Field mustard | cytosol, mitochondrion, nucleus | 19.55 | 26.52 |
| CDX74343 | Canola | nucleus | 18.99 | 25.76 |
| CDX91900 | Canola | cytosol, mitochondrion, nucleus | 18.99 | 25.76 |
Protein Annotations
| EMBL:AK111296 | EnsemblPlants:Os02t0824500-01 | EnsemblPlantsGene:Os02g0824500 | EntrezGene:4331206 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF3 |
| PFAM:PF03763 | ProteinID:BAD22865.1 | ProteinID:BAF10490.1 | ProteinID:BAS81671.1 | ProteinID:EEE58077.1 | RefSeq:XP_015623725.1 |
| RefSeq:XP_015623726.1 | SEG:seg | UniParc:UPI00003B0477 | UniProt:Q6KAA6 | MapMan:35.1 | : |
Description
REMORIN 1.1Similar to Remorin. (Os02t0824500-01)
Coordinates
chr2:+:35424129..35425623
Molecular Weight (calculated)
19369.9 Da
IEP (calculated)
10.001
GRAVY (calculated)
-0.783
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: METQEAKRAD VAAAPATATG GEAVKPAAGD AGAVTKTNGP SAPAGKAATP TGSVDRDAIL ANVELERKLS MIKAWEESEK SKAENKAQKK MSSILSWENT
101: RKAAIEAKLR TQEEKLERKK AEYAEKMRNQ VAAIHKAAEE KRATVEATRH EEIIKYEEMA AKHRSKGTTP TKFLSCFGS
101: RKAAIEAKLR TQEEKLERKK AEYAEKMRNQ VAAIHKAAEE KRATVEATRH EEIIKYEEMA AKHRSKGTTP TKFLSCFGS
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.