Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G45820.1 | EER92997 | AT2G45820.1 | 21798944 |
| AT2G45820.1 | EER93970 | AT2G45820.1 | 21798944 |
| AT2G45820.1 | EES12557 | AT2G45820.1 | 21798944 |
| AT2G45820.1 | KXG31130 | AT2G45820.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002842_P001 | Maize | extracellular, mitochondrion, plasma membrane | 83.02 | 88.44 |
| Zm00001d025932_P003 | Maize | mitochondrion | 70.28 | 74.5 |
| TraesCS2D01G366300.2 | Wheat | nucleus | 74.53 | 73.83 |
| TraesCS2A01G369800.1 | Wheat | nucleus | 73.11 | 73.81 |
| TraesCS2B01G386900.1 | Wheat | nucleus | 74.06 | 73.36 |
| PGSC0003DMT400055730 | Potato | cytosol | 17.92 | 73.08 |
| GSMUA_Achr1P00240_001 | Banana | nucleus | 59.91 | 66.15 |
| KXG31130 | Sorghum | cytosol | 60.85 | 65.82 |
| CDX71754 | Canola | cytosol, mitochondrion, nucleus | 52.83 | 62.22 |
| GSMUA_Achr11P... | Banana | nucleus | 57.08 | 61.73 |
| GSMUA_Achr1P03030_001 | Banana | nucleus | 54.72 | 61.05 |
| Os04t0533300-02 | Rice | extracellular, plasma membrane | 59.91 | 60.77 |
| GSMUA_Achr5P12250_001 | Banana | cytosol | 53.3 | 60.75 |
| PGSC0003DMT400000462 | Potato | cytosol, mitochondrion, nucleus, plastid | 49.53 | 60.34 |
| CDY48933 | Canola | cytosol | 55.19 | 60.31 |
| Bra007589.1-P | Field mustard | nucleus | 55.19 | 60.31 |
| CDY27356 | Canola | nucleus | 54.72 | 59.49 |
| Solyc01g094370.2.1 | Tomato | plastid | 48.58 | 59.2 |
| CDY37068 | Canola | nucleus | 54.25 | 58.97 |
| CDY06318 | Canola | cytosol, nucleus, plastid | 54.25 | 58.97 |
| Bra039311.1-P | Field mustard | cytosol, nucleus, plastid | 54.25 | 58.97 |
| CDX74768 | Canola | nucleus | 52.83 | 58.33 |
| Bra004940.1-P | Field mustard | nucleus | 52.83 | 58.33 |
| EER92997 | Sorghum | nucleus | 49.53 | 58.01 |
| AT2G45820.1 | Thale cress | cytosol | 51.42 | 57.37 |
| GSMUA_Achr4P25330_001 | Banana | nucleus | 48.11 | 57.3 |
| CDY18898 | Canola | cytosol | 51.89 | 57.29 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 49.06 | 56.83 |
| KRH40491 | Soybean | cytosol | 48.11 | 55.74 |
| VIT_15s0046g03180.t01 | Wine grape | nucleus | 50.94 | 55.1 |
| KRH48177 | Soybean | plasma membrane | 51.42 | 55.05 |
| AT3G61260.1 | Thale cress | nucleus | 53.77 | 53.77 |
| Solyc05g048820.2.1 | Tomato | nucleus, plastid | 38.68 | 53.59 |
| KRH65100 | Soybean | cytosol | 49.06 | 52.0 |
| EER93970 | Sorghum | nucleus | 37.26 | 50.97 |
| Solyc10g017540.2.1 | Tomato | nucleus | 40.57 | 45.5 |
| HORVU2Hr1G091680.3 | Barley | cytosol, plasma membrane | 63.68 | 45.0 |
| PGSC0003DMT400026584 | Potato | nucleus | 40.09 | 44.5 |
| GSMUA_Achr5P10760_001 | Banana | cytosol | 52.83 | 41.79 |
| OQU85995 | Sorghum | cytosol | 33.02 | 35.35 |
Protein Annotations
| EnsemblPlants:EES12557 | EnsemblPlantsGene:SORBI_3006G159300 | EntrezGene:8083316 | InterPro:Remorin_C | InterPro:Remorin_N | ncoils:Coil |
| PANTHER:PTHR31775 | PANTHER:PTHR31775:SF13 | PFAM:PF03763 | PFAM:PF03766 | ProteinID:EES12557 | ProteinID:EES12557.1 |
| RefSeq:XP_002448229.1 | SEG:seg | unigene:Sbi.18080 | UniParc:UPI0001A87446 | UniProt:C5YCX2 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr6:-:51782324..51786830
Molecular Weight (calculated)
23164.5 Da
IEP (calculated)
5.219
GRAVY (calculated)
-0.864
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEAAKKVE VEVTKDKEPE AAPAEAVPEA AAKEDVAEEK AVIPATEPPA AEEKPPADDS KALAIVEKVA DEPAPEKPAA EKQGGSNDRD LALARVETEK
101: RNSLIKAWEE NEKTKAENKA AKKVSAILSW ENTKKANIEA QLKKIEEQLE KKKAEYAEKM KNKVAMIHKE AEEKRAMVEA KRGEEVLKAE EMAAKYRATG
201: HAPKKLIGCF GA
101: RNSLIKAWEE NEKTKAENKA AKKVSAILSW ENTKKANIEA QLKKIEEQLE KKKAEYAEKM KNKVAMIHKE AEEKRAMVEA KRGEEVLKAE EMAAKYRATG
201: HAPKKLIGCF GA
001: MAEEQKIALE SESPAKVTTP APADTPAPAP AEIPAPAPAP TPADVTKDVA EEKIQNPPPE QIFDDSKALT VVEKPVEEPA PAKPASASLD RDVKLADLSK
101: EKRLSFVRAW EESEKSKAEN KAEKKIADVH AWENSKKAAV EAQLKKIEEQ LEKKKAEYAE RMKNKVAAIH KEAEERRAMI EAKRGEDVLK AEETAAKYRA
201: TGIVPKATCG CF
101: EKRLSFVRAW EESEKSKAEN KAEKKIADVH AWENSKKAAV EAQLKKIEEQ LEKKKAEYAE RMKNKVAAIH KEAEERRAMI EAKRGEDVLK AEETAAKYRA
201: TGIVPKATCG CF
Arabidopsis Description
Uncharacterized protein At3g61260 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2D8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.