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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • extracellular 1
  • cytosol 1
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr1P00240_001
GSMUA_Achr1P03030_001
GSMUA_Achr4P25330_001
GSMUA_Achr5P10760_001
GSMUA_Achr5P12250_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G45820.1 GSMUA_Achr11P... AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr1P00240_001 AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr1P03030_001 AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr4P25330_001 AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr5P10760_001 AT2G45820.1 21798944
AT2G45820.1 GSMUA_Achr5P12250_001 AT2G45820.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P12250_001 Banana cytosol 67.71 69.89
PGSC0003DMT400055730 Potato cytosol 18.75 69.23
TraesCS6B01G265700.2 Wheat cytosol 65.62 65.97
TraesCS6A01G237200.2 Wheat cytosol 64.58 64.25
GSMUA_Achr1P03030_001 Banana nucleus 63.54 64.21
GSMUA_Achr4P25330_001 Banana nucleus 58.85 63.48
TraesCS6D01G219800.1 Wheat cytosol 63.02 63.35
Zm00001d002842_P001 Maize extracellular, mitochondrion, plasma membrane 65.62 63.32
Zm00001d025932_P003 Maize mitochondrion 65.1 62.5
GSMUA_Achr7P04410_001 Banana plasma membrane 55.21 61.99
GSMUA_Achr11P... Banana nucleus 61.98 60.71
EES12557 Sorghum cytosol 66.15 59.91
KXG31130 Sorghum cytosol 60.42 59.18
CDX74768 Canola nucleus 57.81 57.81
Bra004940.1-P Field mustard nucleus 57.81 57.81
CDY27356 Canola nucleus 58.33 57.44
CDY37068 Canola nucleus 58.33 57.44
Bra039311.1-P Field mustard cytosol, nucleus, plastid 58.33 57.44
HORVU6Hr1G060700.5 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 56.77 57.07
Zm00001d017386_P001 Maize cytosol 55.21 56.99
CDY06318 Canola cytosol, nucleus, plastid 57.81 56.92
Os03t0111200-01 Rice nucleus 51.04 56.0
CDY18898 Canola cytosol 55.73 55.73
TraesCS2A01G369800.1 Wheat nucleus 60.94 55.71
TraesCS2B01G386900.1 Wheat nucleus 61.98 55.61
TraesCS1A01G174700.1 Wheat nucleus 51.04 55.37
TraesCS1D01G164300.1 Wheat nucleus 51.04 55.37
TraesCS2D01G366300.2 Wheat nucleus 61.46 55.14
CDX71754 Canola cytosol, mitochondrion, nucleus 51.56 55.0
KRH00705 Soybean cytosol, nucleus, plastid 51.56 54.1
VIT_15s0046g03180.t01 Wine grape nucleus 55.21 54.08
Os04t0533300-02 Rice extracellular, plasma membrane 58.85 54.07
PGSC0003DMT400000462 Potato cytosol, mitochondrion, nucleus, plastid 47.92 52.87
AT2G45820.1 Thale cress cytosol 52.08 52.63
KRH48177 Soybean plasma membrane 54.17 52.53
Solyc01g094370.2.1 Tomato plastid 47.4 52.3
Os02t0642200-01 Rice plasma membrane 55.21 52.22
EER92997 Sorghum nucleus 48.96 51.93
AT3G61260.1 Thale cress nucleus 57.29 51.89
Bra007589.1-P Field mustard nucleus 52.08 51.55
CDY48933 Canola cytosol 52.08 51.55
KRH40491 Soybean cytosol 48.96 51.37
GSMUA_Achr3P14410_001 Banana nucleus 43.75 51.22
TraesCSU01G033600.1 Wheat cytosol 45.83 50.29
TraesCS4B01G393000.1 Wheat cytosol 45.83 50.29
TraesCS5A01G554600.1 Wheat cytosol 46.35 50.28
Zm00001d027330_P001 Maize extracellular, mitochondrion, plasma membrane 47.92 50.27
KRH65100 Soybean cytosol 52.08 50.0
HORVU4Hr1G089540.2 Barley cytosol 45.31 49.71
Solyc05g048820.2.1 Tomato nucleus, plastid 39.06 49.02
EER93970 Sorghum nucleus 38.02 47.1
GSMUA_Achr5P10760_001 Banana cytosol 61.98 44.4
GSMUA_Achr11P... Banana cytosol 39.58 44.19
HORVU1Hr1G045920.1 Barley nucleus 22.92 41.51
Solyc10g017540.2.1 Tomato nucleus 40.62 41.27
PGSC0003DMT400026584 Potato nucleus 40.62 40.84
Os10t0503800-01 Rice nucleus 28.12 40.6
HORVU2Hr1G091680.3 Barley cytosol, plasma membrane 56.77 36.33
Protein Annotations
EnsemblPlants:GSMUA_Achr1P00240_001EnsemblPlants:GSMUA_Achr1T00240_001EnsemblPlantsGene:GSMUA_Achr1G00240_001InterPro:Remorin_CInterPro:Remorin_Nncoils:Coil
PANTHER:PTHR31775PANTHER:PTHR31775:SF13PFAM:PF03763PFAM:PF03766SEG:segUniParc:UPI0002951D9C
UniProt:M0RVT2MapMan:35.1::::
Description
Remorin [Source:GMGC_GENE;Acc:GSMUA_Achr1G00240_001]
Coordinates
chr1:-:189723..201821
Molecular Weight (calculated)
21110.1 Da
IEP (calculated)
5.186
GRAVY (calculated)
-0.839
Length
192 amino acids
Sequence
(BLAST)
001: MGAEEPKQVE AEAAPEPPPA AEAVKDVAEE KASVPPPAEE KPDDSKALAI VEKVEDPPAE KSSGGSTERD AVLARLETEK RLSLIKAWEE NEKTKAENKA
101: VKKLSSILAW ENTKKAAVEA ELRRKEEELE KRKAEYAEKM KNKVALLHKE AEEKRAMIEA RRGEELLKAD EVAAKYRATG LAPKKLLGCF GA
Best Arabidopsis Sequence Match ( AT3G61260.1 )
(BLAST)
001: MAEEQKIALE SESPAKVTTP APADTPAPAP AEIPAPAPAP TPADVTKDVA EEKIQNPPPE QIFDDSKALT VVEKPVEEPA PAKPASASLD RDVKLADLSK
101: EKRLSFVRAW EESEKSKAEN KAEKKIADVH AWENSKKAAV EAQLKKIEEQ LEKKKAEYAE RMKNKVAAIH KEAEERRAMI EAKRGEDVLK AEETAAKYRA
201: TGIVPKATCG CF
Arabidopsis Description
Uncharacterized protein At3g61260 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2D8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.