Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37068 | Canola | nucleus | 83.16 | 81.03 |
| Bra039311.1-P | Field mustard | cytosol, nucleus, plastid | 82.63 | 80.51 |
| CDY06318 | Canola | cytosol, nucleus, plastid | 82.11 | 80.0 |
| Bra004940.1-P | Field mustard | nucleus | 80.53 | 79.69 |
| CDX74768 | Canola | nucleus | 80.53 | 79.69 |
| CDY18898 | Canola | cytosol | 79.47 | 78.65 |
| CDY27356 | Canola | nucleus | 76.84 | 74.87 |
| PGSC0003DMT400055730 | Potato | cytosol | 17.37 | 63.46 |
| AT3G61260.1 | Thale cress | nucleus | 68.42 | 61.32 |
| KRH48177 | Soybean | plasma membrane | 63.16 | 60.61 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 55.79 | 57.92 |
| AT3G48940.1 | Thale cress | nucleus | 53.16 | 57.71 |
| PGSC0003DMT400000462 | Potato | cytosol, mitochondrion, nucleus, plastid | 52.63 | 57.47 |
| VIT_15s0046g03180.t01 | Wine grape | nucleus | 58.95 | 57.14 |
| KRH65100 | Soybean | cytosol | 58.95 | 56.0 |
| Solyc01g094370.2.1 | Tomato | plastid | 51.05 | 55.75 |
| Solyc05g048820.2.1 | Tomato | nucleus, plastid | 44.21 | 54.9 |
| GSMUA_Achr1P03030_001 | Banana | nucleus | 54.74 | 54.74 |
| KRH40491 | Soybean | cytosol | 52.63 | 54.64 |
| GSMUA_Achr11P... | Banana | nucleus | 55.79 | 54.08 |
| Zm00001d002842_P001 | Maize | extracellular, mitochondrion, plasma membrane | 56.32 | 53.77 |
| GSMUA_Achr4P25330_001 | Banana | nucleus | 49.47 | 52.81 |
| GSMUA_Achr1P00240_001 | Banana | nucleus | 52.63 | 52.08 |
| TraesCS2A01G369800.1 | Wheat | nucleus | 57.37 | 51.9 |
| EES12557 | Sorghum | cytosol | 57.37 | 51.42 |
| TraesCS2B01G386900.1 | Wheat | nucleus | 57.37 | 50.93 |
| TraesCS2D01G366300.2 | Wheat | nucleus | 57.37 | 50.93 |
| TraesCS6D01G219800.1 | Wheat | cytosol | 50.0 | 49.74 |
| TraesCS6B01G265700.2 | Wheat | cytosol | 49.47 | 49.21 |
| TraesCS5A01G554600.1 | Wheat | cytosol | 45.79 | 49.15 |
| Os03t0111200-01 | Rice | nucleus | 45.26 | 49.14 |
| TraesCS4B01G393000.1 | Wheat | cytosol | 45.26 | 49.14 |
| TraesCSU01G033600.1 | Wheat | cytosol | 45.26 | 49.14 |
| HORVU4Hr1G089540.2 | Barley | cytosol | 45.26 | 49.14 |
| TraesCS6A01G237200.2 | Wheat | cytosol | 49.47 | 48.7 |
| TraesCS1A01G174700.1 | Wheat | nucleus | 45.26 | 48.59 |
| TraesCS1D01G164300.1 | Wheat | nucleus | 45.26 | 48.59 |
| KXG31130 | Sorghum | cytosol | 50.0 | 48.47 |
| Zm00001d025932_P003 | Maize | mitochondrion | 50.0 | 47.5 |
| Zm00001d017386_P001 | Maize | cytosol | 45.79 | 46.77 |
| EER93970 | Sorghum | nucleus | 37.89 | 46.45 |
| EER92997 | Sorghum | nucleus | 44.21 | 46.41 |
| GSMUA_Achr5P12250_001 | Banana | cytosol | 45.26 | 46.24 |
| Os04t0533300-02 | Rice | extracellular, plasma membrane | 50.53 | 45.93 |
| AT5G23750.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 53.68 | 44.54 |
| Os02t0642200-01 | Rice | plasma membrane | 47.37 | 44.34 |
| HORVU6Hr1G060700.5 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 43.68 | 43.46 |
| Zm00001d027330_P001 | Maize | extracellular, mitochondrion, plasma membrane | 41.58 | 43.17 |
| PGSC0003DMT400026584 | Potato | nucleus | 43.16 | 42.93 |
| Solyc10g017540.2.1 | Tomato | nucleus | 42.11 | 42.33 |
| HORVU1Hr1G045920.1 | Barley | nucleus | 23.16 | 41.51 |
| GSMUA_Achr5P10760_001 | Banana | cytosol | 48.95 | 34.7 |
| Os10t0503800-01 | Rice | nucleus | 23.16 | 33.08 |
| HORVU2Hr1G091680.3 | Barley | cytosol, plasma membrane | 51.58 | 32.67 |
| AT1G63295.2 | Thale cress | endoplasmic reticulum, nucleus, plastid | 28.95 | 28.8 |
| AT4G00670.1 | Thale cress | nucleus | 18.42 | 28.46 |
Protein Annotations
| MapMan:35.1 | EntrezGene:819190 | UniProt:A0A178VVM7 | ProteinID:AAA57124.1 | ProteinID:AAC28542.1 | ProteinID:AEC10605.1 |
| ArrayExpress:AT2G45820 | EnsemblPlantsGene:AT2G45820 | RefSeq:AT2G45820 | TAIR:AT2G45820 | RefSeq:AT2G45820-TAIR-G | EnsemblPlants:AT2G45820.1 |
| TAIR:AT2G45820.1 | EMBL:AY045996 | EMBL:AY079329 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 |
| RefSeq:NP_182106.1 | UniProt:O80837 | ProteinID:OAP09888.1 | PFAM:PF03763 | PFAM:PF03766 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF2 |
| InterPro:Remorin_C | InterPro:Remorin_N | UniParc:UPI00000AAA09 | SEG:seg | : | : |
Description
DBPRemorin [Source:UniProtKB/Swiss-Prot;Acc:O80837]
Coordinates
chr2:-:18862953..18864741
Molecular Weight (calculated)
20969.1 Da
IEP (calculated)
9.040
GRAVY (calculated)
-0.814
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQKTSKV DVESPAVLAP AKEPTPAPVE VADEKIHNPP PVESKALAVV EKPIEEHTPK KASSGSADRD VILADLEKEK KTSFIKAWEE SEKSKAENRA
101: QKKISDVHAW ENSKKAAVEA QLRKIEEKLE KKKAQYGEKM KNKVAAIHKL AEEKRAMVEA KKGEELLKAE EMGAKYRATG VVPKATCGCF
101: QKKISDVHAW ENSKKAAVEA QLRKIEEKLE KKKAQYGEKM KNKVAAIHKL AEEKRAMVEA KKGEELLKAE EMGAKYRATG VVPKATCGCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.