Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 2
- plastid 2
- endoplasmic reticulum 2
- plasma membrane 2
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027633.1-P | Field mustard | cytosol | 60.21 | 71.43 |
| CDY66598 | Canola | cytosol, nucleus, plastid | 29.32 | 53.85 |
| GSMUA_Achr3P14410_001 | Banana | nucleus | 27.75 | 32.32 |
| VIT_02s0025g03780.t01 | Wine grape | nucleus | 31.41 | 32.09 |
| KRH59848 | Soybean | extracellular | 27.75 | 28.96 |
| AT2G45820.1 | Thale cress | cytosol | 28.8 | 28.95 |
| KRH77513 | Soybean | cytosol, nucleus, plastid | 28.8 | 28.8 |
| AT3G48940.1 | Thale cress | nucleus | 25.65 | 28.0 |
| PGSC0003DMT400007918 | Potato | cytosol | 27.75 | 27.89 |
| AT5G23750.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 32.98 | 27.51 |
| KRH41149 | Soybean | extracellular | 27.23 | 26.8 |
| GSMUA_Achr11P... | Banana | cytosol | 23.56 | 26.16 |
| AT3G61260.1 | Thale cress | nucleus | 27.75 | 25.0 |
| KRH27955 | Soybean | nucleus | 25.65 | 22.79 |
| AT4G00670.1 | Thale cress | nucleus | 10.47 | 16.26 |
Protein Annotations
| ArrayExpress:AT1G63295 | EnsemblPlants:AT1G63295.2 | EnsemblPlantsGene:AT1G63295 | EntrezGene:10723038 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | PFAM:PF03763 | ProteinID:ANM59077.1 | RefSeq:AT1G63295 | RefSeq:AT1G63295-TAIR-G |
| RefSeq:NP_001185299.2 | SEG:seg | TAIR:AT1G63295 | Unigene:At.75549 | UniParc:UPI00084942EE | UniProt:A0A1P8AR54 |
| MapMan:35.2 | : | : | : | : | : |
Description
Remorin family protein [Source:TAIR;Acc:AT1G63295]
Coordinates
chr1:-:23474069..23475532
Molecular Weight (calculated)
22435.0 Da
IEP (calculated)
9.283
GRAVY (calculated)
-0.923
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFQSFELLV STNCSFYFYF SVKISQKYKG RRTDEKRNPN MHMGQNKPVQ KKSPLYEEST IIFASSQNEK LVEIEKEKRL ALIDAWEENE KAKAQTKAYK
101: ELCSIESWEN NMKTALELDL KKMEENLQVE KTEFSKKFKK KIPEIEKIAE AKREKIEKQK EQESIKVEKI SEKLIATPNA YPPNTKTCGC F
101: ELCSIESWEN NMKTALELDL KKMEENLQVE KTEFSKKFKK KIPEIEKIAE AKREKIEKQK EQESIKVEKI SEKLIATPNA YPPNTKTCGC F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.