Factsheet for Bra027633.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66598	Canola	cytosol, nucleus, plastid	41.61	64.42
AT1G63295.2	Thale cress	endoplasmic reticulum, nucleus, plastid	71.43	60.21
VIT_02s0025g03780.t01	Wine grape	nucleus	36.02	31.02
Bra018025.1-P	Field mustard	cytosol, mitochondrion, nucleus	32.3	29.71
Bra026483.1-P	Field mustard	nucleus	35.4	28.93
Bra009707.1-P	Field mustard	nucleus	36.65	28.78
GSMUA_Achr3P14410_001	Banana	nucleus	29.19	28.66
Bra007589.1-P	Field mustard	nucleus	32.3	26.8
KRH59848	Soybean	extracellular	29.81	26.23
KRH77513	Soybean	cytosol, nucleus, plastid	31.06	26.18
Bra039311.1-P	Field mustard	cytosol, nucleus, plastid	31.68	26.15
Bra004940.1-P	Field mustard	nucleus	31.06	26.04
KRH41149	Soybean	extracellular	29.19	24.23
KRH27955	Soybean	nucleus	30.43	22.79
GSMUA_Achr11P...	Banana	cytosol	24.22	22.67
PGSC0003DMT400007918	Potato	cytosol	26.71	22.63
Bra000964.1-P	Field mustard	cytosol, mitochondrion, nucleus	9.32	11.36

Protein Annotations

EnsemblPlants:Bra027633.1	EnsemblPlants:Bra027633.1-P	EnsemblPlantsGene:Bra027633	InterPro:Remorin_C	ncoils:Coil	PANTHER:PTHR31775
PANTHER:PTHR31775:SF5	PFAM:PF03763	SEG:seg	UniParc:UPI0002542480	UniProt:M4EFS0	MapMan:35.2

Description

AT5G23750 (E=2e-014) | remorin family protein

Coordinates

chrA09:+:7256084..7257437

Molecular Weight (calculated)

18657.3 Da

IEP (calculated)

9.386

GRAVY (calculated)

-1.176

Length

161 amino acids

Sequence
(BLAST)

001: MKKKTNEKRN PNMGQAKQAK NDSPLHEQCT TILSSNQNEN FVEIEKEKTI ALINAWEENE KAKAQTKAYK ELCSIEAWEN NMKTSLELDL KKMEENSEVE
101: QAEYSKRFKK KIPEIEKIAE AKREKIEKLK EQKSINLKKM SEKLSATPNA YPPKTKTCGC F

Best Arabidopsis Sequence Match ( AT1G63295.2 )
(BLAST)

001: MPFQSFELLV STNCSFYFYF SVKISQKYKG RRTDEKRNPN MHMGQNKPVQ KKSPLYEEST IIFASSQNEK LVEIEKEKRL ALIDAWEENE KAKAQTKAYK
101: ELCSIESWEN NMKTALELDL KKMEENLQVE KTEFSKKFKK KIPEIEKIAE AKREKIEKQK EQESIKVEKI SEKLIATPNA YPPNTKTCGC F

Arabidopsis Description

Remorin family protein [Source:TAIR;Acc:AT1G63295]
SUBAcon: [endoplasmic reticulum,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.