Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- plasma membrane 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
extracellular:
25724908
|
msms PMID:
25724908
doi
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH59848 | Soybean | extracellular | 82.47 | 87.43 |
VIT_02s0025g03780.t01 | Wine grape | nucleus | 45.36 | 47.06 |
KRH77513 | Soybean | cytosol, nucleus, plastid | 45.36 | 46.07 |
GSMUA_Achr3P14410_001 | Banana | nucleus | 37.63 | 44.51 |
KRH35326 | Soybean | nucleus | 44.33 | 44.33 |
PGSC0003DMT400007918 | Potato | cytosol | 41.75 | 42.63 |
KRH00705 | Soybean | cytosol, nucleus, plastid | 40.21 | 42.62 |
KRH40491 | Soybean | cytosol | 40.21 | 42.62 |
KRG91502 | Soybean | nucleus | 42.78 | 42.13 |
KRH09020 | Soybean | nucleus | 44.33 | 41.95 |
KRH27955 | Soybean | nucleus | 45.88 | 41.4 |
KRH48177 | Soybean | plasma membrane | 41.24 | 40.4 |
KRH38487 | Soybean | nucleus | 42.78 | 40.29 |
GSMUA_Achr11P... | Banana | cytosol | 34.54 | 38.95 |
KRH65100 | Soybean | cytosol | 39.69 | 38.5 |
CDY66598 | Canola | cytosol, nucleus, plastid | 16.49 | 30.77 |
Bra027633.1-P | Field mustard | cytosol | 24.23 | 29.19 |
AT1G63295.2 | Thale cress | endoplasmic reticulum, nucleus, plastid | 26.8 | 27.23 |
Protein Annotations
EMBL:ACUP02004750 | EnsemblPlants:KRH41149 | EnsemblPlantsGene:GLYMA_08G012800 | EntrezGene:100527523 | InterPro:Remorin_C | ncoils:Coil |
PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | PFAM:PF03763 | ProteinID:KRH41149 | ProteinID:KRH41149.1 | SEG:seg |
UniParc:UPI00023C5C27 | UniProt:I1KP84 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:993659..997476
Molecular Weight (calculated)
22389.7 Da
IEP (calculated)
10.521
GRAVY (calculated)
-0.906
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSGNQRGK EVENTHTSSG VRQEYAFSPL NLSLFAKWNR FRSFLVILSK KVKKKVPTTT RTDSKDSVDR DAVLARVESE KRLALIRAWE ESEKTKAENR
101: AYKRHNAVVL WENSKKASAE AHLKRIEEKL DRNKAKCVEK MQNNVAEIHR TAEEKRAMIE ANRGEEFLEI EEKAAKFRTR GYSPRKYLPC FGSS
101: AYKRHNAVVL WENSKKASAE AHLKRIEEKL DRNKAKCVEK MQNNVAEIHR TAEEKRAMIE ANRGEEFLEI EEKAAKFRTR GYSPRKYLPC FGSS
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.