Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 4
  • extracellular 1
  • plasma membrane 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:extracellular, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:nucleus
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
extracellular: 25724908
msms PMID: 25724908 doi
VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH59848 Soybean extracellular 82.47 87.43
VIT_02s0025g03780.t01 Wine grape nucleus 45.36 47.06
KRH77513 Soybean cytosol, nucleus, plastid 45.36 46.07
GSMUA_Achr3P14410_001 Banana nucleus 37.63 44.51
KRH35326 Soybean nucleus 44.33 44.33
PGSC0003DMT400007918 Potato cytosol 41.75 42.63
KRH00705 Soybean cytosol, nucleus, plastid 40.21 42.62
KRH40491 Soybean cytosol 40.21 42.62
KRG91502 Soybean nucleus 42.78 42.13
KRH09020 Soybean nucleus 44.33 41.95
KRH27955 Soybean nucleus 45.88 41.4
KRH48177 Soybean plasma membrane 41.24 40.4
KRH38487 Soybean nucleus 42.78 40.29
GSMUA_Achr11P... Banana cytosol 34.54 38.95
KRH65100 Soybean cytosol 39.69 38.5
CDY66598 Canola cytosol, nucleus, plastid 16.49 30.77
Bra027633.1-P Field mustard cytosol 24.23 29.19
AT1G63295.2 Thale cress endoplasmic reticulum, nucleus, plastid 26.8 27.23
Protein Annotations
EMBL:ACUP02004750EnsemblPlants:KRH41149EnsemblPlantsGene:GLYMA_08G012800EntrezGene:100527523InterPro:Remorin_Cncoils:Coil
PANTHER:PTHR31775PANTHER:PTHR31775:SF5PFAM:PF03763ProteinID:KRH41149ProteinID:KRH41149.1SEG:seg
UniParc:UPI00023C5C27UniProt:I1KP84MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr8:-:993659..997476
Molecular Weight (calculated)
22389.7 Da
IEP (calculated)
10.521
GRAVY (calculated)
-0.906
Length
194 amino acids
Sequence
(BLAST)
001: MGVSGNQRGK EVENTHTSSG VRQEYAFSPL NLSLFAKWNR FRSFLVILSK KVKKKVPTTT RTDSKDSVDR DAVLARVESE KRLALIRAWE ESEKTKAENR
101: AYKRHNAVVL WENSKKASAE AHLKRIEEKL DRNKAKCVEK MQNNVAEIHR TAEEKRAMIE ANRGEEFLEI EEKAAKFRTR GYSPRKYLPC FGSS
Best Arabidopsis Sequence Match ( AT5G23750.2 )
(BLAST)
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.