Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38487 | Soybean | nucleus | 92.2 | 91.75 |
| CDY69344 | Canola | cytosol | 46.83 | 73.85 |
| KRH35326 | Soybean | nucleus | 69.76 | 73.71 |
| KRG91502 | Soybean | nucleus | 70.24 | 73.1 |
| VIT_16s0050g00080.t01 | Wine grape | nucleus | 65.37 | 68.37 |
| CDY05883 | Canola | mitochondrion | 39.02 | 66.67 |
| Bra018025.1-P | Field mustard | cytosol, mitochondrion, nucleus | 54.63 | 64.0 |
| PGSC0003DMT400037192 | Potato | cytosol | 60.49 | 62.63 |
| Solyc03g025850.2.1 | Tomato | nucleus | 60.0 | 62.44 |
| AT3G48940.1 | Thale cress | nucleus | 53.17 | 62.29 |
| GSMUA_Achr7P04410_001 | Banana | plasma membrane | 51.71 | 61.99 |
| CDY71834 | Canola | cytosol, mitochondrion, nucleus | 53.17 | 61.93 |
| Solyc06g035920.2.1 | Tomato | nucleus | 54.15 | 60.0 |
| Solyc06g035910.1.1 | Tomato | cytosol, mitochondrion, nucleus | 20.49 | 58.33 |
| CDX87157 | Canola | cytosol | 55.12 | 58.25 |
| KRH48177 | Soybean | plasma membrane | 56.1 | 58.08 |
| Bra026483.1-P | Field mustard | nucleus | 54.63 | 56.85 |
| CDX88048 | Canola | nucleus | 56.59 | 56.59 |
| Bra009707.1-P | Field mustard | nucleus | 56.59 | 56.59 |
| KRH65100 | Soybean | cytosol | 54.63 | 56.0 |
| KRH00705 | Soybean | cytosol, nucleus, plastid | 48.29 | 54.1 |
| KRH40491 | Soybean | cytosol | 47.8 | 53.55 |
| AT5G23750.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 57.56 | 51.53 |
| KRH77513 | Soybean | cytosol, nucleus, plastid | 42.93 | 46.07 |
| KRH41149 | Soybean | extracellular | 41.95 | 44.33 |
| KRH59848 | Soybean | extracellular | 39.02 | 43.72 |
| KRH27955 | Soybean | nucleus | 41.95 | 40.0 |
| Solyc06g035900.1.1 | Tomato | cytosol | 13.66 | 32.18 |
Protein Annotations
| EMBL:ACUP02010263 | EMBL:BT089217 | EnsemblPlants:KRH09020 | EnsemblPlantsGene:GLYMA_16G189500 | EntrezGene:100499700 | InterPro:Remorin_C |
| InterPro:Remorin_N | ncoils:Coil | PANTHER:PTHR31775 | PANTHER:PTHR31775:SF5 | PFAM:PF03763 | PFAM:PF03766 |
| ProteinID:KRH09020 | ProteinID:KRH09020.1 | SEG:seg | UniParc:UPI0001B1575F | UniProt:C6SVM4 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr16:-:35202920..35206459
Molecular Weight (calculated)
22268.2 Da
IEP (calculated)
5.557
GRAVY (calculated)
-0.791
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEEQTKTAE SESVTPPPAA APSQAPPAAE AEHVPEAPKD VAEEKSVIPV PSSDDKPDES KALVLVEKTQ EVAEVKPTEG SVNRDAVLAR VATEKRLSLI
101: KAWEESEKSK AENKAHKKLS SVSAWENSKK AAVEADLKKI EEELEKKKAE AAEKIKNKIA AIHKEAEERR AIIEAKKGED LLKAEEQAAK YRATGTAPKK
201: LLGCF
101: KAWEESEKSK AENKAHKKLS SVSAWENSKK AAVEADLKKI EEELEKKKAE AAEKIKNKIA AIHKEAEERR AIIEAKKGED LLKAEEQAAK YRATGTAPKK
201: LLGCF
001: MTLEEQKKVI MPEAVASEPS PPSKEEKSDD SKAIVLVVAA KEPTEDKKVG SVHRDAVLVR LEQDKRISLI KAWEEAEKSK VENKAQKKIS SVGAWENSKK
101: ASVEAELKKI EEQLNKKKAH YTEQMKNKIA QIHKEAEEKR AMTEAKRGED VLKAEEMAAK YRATGTAPTK LFGFF
101: ASVEAELKKI EEQLNKKKAH YTEQMKNKIA QIHKEAEEKR AMTEAKRGED VLKAEEMAAK YRATGTAPTK LFGFF
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.