Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88048 | Canola | nucleus | 100.0 | 100.0 |
| Bra026483.1-P | Field mustard | nucleus | 77.07 | 80.2 |
| AT5G23750.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 76.1 | 68.12 |
| Bra018025.1-P | Field mustard | cytosol, mitochondrion, nucleus | 57.56 | 67.43 |
| VIT_16s0050g00080.t01 | Wine grape | nucleus | 59.02 | 61.73 |
| PGSC0003DMT400037192 | Potato | cytosol | 59.51 | 61.62 |
| Solyc03g025850.2.1 | Tomato | nucleus | 58.54 | 60.91 |
| GSMUA_Achr7P04410_001 | Banana | plasma membrane | 50.24 | 60.23 |
| KRG91502 | Soybean | nucleus | 57.07 | 59.39 |
| KRH35326 | Soybean | nucleus | 56.1 | 59.28 |
| Solyc06g035910.1.1 | Tomato | cytosol, mitochondrion, nucleus | 20.49 | 58.33 |
| Solyc06g035920.2.1 | Tomato | nucleus | 51.22 | 56.76 |
| KRH09020 | Soybean | nucleus | 56.59 | 56.59 |
| KRH38487 | Soybean | nucleus | 56.59 | 56.31 |
| Bra039311.1-P | Field mustard | cytosol, nucleus, plastid | 51.22 | 53.85 |
| Bra004940.1-P | Field mustard | nucleus | 49.76 | 53.12 |
| Bra007589.1-P | Field mustard | nucleus | 47.32 | 50.0 |
| Bra027633.1-P | Field mustard | cytosol | 28.78 | 36.65 |
| Solyc06g035900.1.1 | Tomato | cytosol | 13.17 | 31.03 |
| Bra000964.1-P | Field mustard | cytosol, mitochondrion, nucleus | 16.59 | 25.76 |
Protein Annotations
Description
AT5G23750 (E=2e-049) | remorin family protein
Coordinates
chrA06:-:16659645..16661157
Molecular Weight (calculated)
22713.3 Da
IEP (calculated)
5.351
GRAVY (calculated)
-0.763
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEEQNKVT ENVTTVSEPT PSTPAPVEKP VDAVDVAPQE KPVAPPPVLP SPAPVEEKLE DSKAIVPIVA KEAGEEKKEG SVNRDAVLAR VETEKRMSLI
101: KAWEEAEKCK VENKAEKKLS SIGSWENNKK AAVEAELKKM EEQLEKKKAE YVELMKNKIA QIHKQAEEKR AMIEARRGEE VLKAEELAAK YRATGTAPKK
201: LFGCM
101: KAWEEAEKCK VENKAEKKLS SIGSWENNKK AAVEAELKKM EEQLEKKKAE YVELMKNKIA QIHKQAEEKR AMIEARRGEE VLKAEELAAK YRATGTAPKK
201: LFGCM
001: MAEEEPKKVT ETVSEPTPTP EVPVEKPAAA ADVAPQEKPV APPPVLPSPA PAEEKQEDSK AIVPVVPKVE EEKKEGSVNR DAVLARVETE KRMSLIKAWE
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
101: EAEKCKVENK AEKKLSSIGS WENNKKAAVE AELKKMEEQL EKKKAEYVEQ MKNKIAQIHK EAEEKRAMIE AKRGEEILKA EELAAKYRAT GTAPKKLFGC
201: M
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT5G23750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.