Factsheet for Bra015506.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001592.1-P
Bra004677.1-P
Bra005553.1-P
Bra007528.1-P
Bra014494.1-P
Bra017999.1-P
Bra019587.1-P
Bra020657.1-P
Bra037430.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06510.1	Bra005553.1-P	AT2G32840.1	21798944
AT1G06510.1	Bra004677.1-P	AT2G42260.1	21798944
AT1G06510.1	Bra001592.1-P	AT3G15360.1	21798944
AT1G06510.1	Bra017999.1-P	AT3G49240.1	21798944
AT1G06510.1	Bra019587.1-P	AT3G49240.1	21798944
AT1G06510.1	Bra007528.1-P	AT3G60360.1	21798944
AT1G06510.1	Bra014494.1-P	AT3G60360.1	21798944
AT1G06510.1	Bra020657.1-P	AT5G49210.1	21798944
AT1G06510.1	Bra037430.1-P	AT5G49210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06646	Canola	plastid	98.9	98.9
AT1G06510.1	Thale cress	plastid	77.29	76.17
VIT_12s0028g00200.t01	Wine grape	mitochondrion	51.28	48.78
KRH73638	Soybean	plastid	46.52	43.34
PGSC0003DMT400054832	Potato	cytosol	45.79	43.1
Solyc10g007730.2.1	Tomato	cytosol	45.05	42.41
KRH14485	Soybean	plastid	43.59	40.2
GSMUA_Achr7P17650_001	Banana	plastid	37.73	36.27
Os01t0696000-02	Rice	plastid	34.8	31.25
TraesCS3A01G257600.1	Wheat	plastid	33.33	31.06
TraesCS3B01G290400.1	Wheat	plastid	33.33	31.06
TraesCS3D01G257600.1	Wheat	mitochondrion, plastid	32.23	30.66
HORVU3Hr1G065350.1	Barley	plastid	30.04	28.47
KXG33191	Sorghum	mitochondrion	30.04	26.28
Zm00001d043764_P005	Maize	mitochondrion	33.33	24.86

Protein Annotations

EnsemblPlants:Bra015506.1	EnsemblPlants:Bra015506.1-P	EnsemblPlantsGene:Bra015506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	ncoils:Coil	PANTHER:PTHR37174	SEG:seg
UniParc:UPI0002545130	UniProt:M4DG83	MapMan:35.2	:	:	:

Description

AT1G06510 (E=3e-102) | unknown protein

Coordinates

chrA10:-:1347480..1348576

Molecular Weight (calculated)

30409.9 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.497

Length

273 amino acids

Sequence
(BLAST)

001: MATTTTSVVG APLVVARSRR IPTTLKCFAS TANSELLRSQ LDQLHAEAES TRAKANSNRL RLLRLSEAAE NLRRQASLHV QTGKENDARE LLLQKKKVMQ
101: ALDKAKARIE LLDTLSSKLN EAISVKETQL IGNISLDLEV DRERTSDGVH IVSPKPESTE EGHENDQTDL GSQESQLIEN NFEEHQETGL EEALTGNIFS
201: EVSSYESFLE NLDQKLGRIE DELVTVVNVA SLVLSHEDKP KNLKVQQTSE ILEEIRCVRE RIASIICKEA NIS

Best Arabidopsis Sequence Match ( AT1G06510.1 )
(BLAST)

001: MVTTTIGGVP VVIAQSRRIP TSLRCFSATA NSDLLRSQLD RLHAEAESTR AKANSNRLRL LRLSEAAENL REQAAVNVRT GKENDARDLL LQKKKVMQAL
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS

Arabidopsis Description

Forkhead-associated domain protein [Source:UniProtKB/TrEMBL;Acc:Q84K72]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.