CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX71815
CDX75826
CDX79885
CDX82437
CDX86248
CDX86985
CDY00193
CDY05913
CDY05914
CDY08118
CDY12159
CDY33924
CDY41170
CDY52552
CDY53501
CDY56435
CDY56997
CDY58906
CDY70877

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06510.1	CDY12159	AT2G32840.1	21798944
AT1G06510.1	CDY52552	AT2G32840.1	21798944
AT1G06510.1	CDX79885	AT2G42260.1	21798944
AT1G06510.1	CDY53501	AT2G42260.1	21798944
AT1G06510.1	CDX75826	AT3G15360.1	21798944
AT1G06510.1	CDX82437	AT3G15360.1	21798944
AT1G06510.1	CDX86985	AT3G49240.1	21798944
AT1G06510.1	CDY00193	AT3G49240.1	21798944
AT1G06510.1	CDY05913	AT3G49240.1	21798944
AT1G06510.1	CDY05914	AT3G49240.1	21798944
AT1G06510.1	CDY08118	AT3G49240.1	21798944
AT1G06510.1	CDX71815	AT3G60360.1	21798944
AT1G06510.1	CDY41170	AT3G60360.1	21798944
AT1G06510.1	CDY56997	AT3G60360.1	21798944
AT1G06510.1	CDY58906	AT3G60360.1	21798944
AT1G06510.1	CDX86248	AT5G49210.1	21798944
AT1G06510.1	CDY33924	AT5G49210.1	21798944
AT1G06510.1	CDY56435	AT5G49210.1	21798944
AT1G06510.1	CDY70877	AT5G49210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015506.1-P	Field mustard	plastid	98.9	98.9
CDY10205	Canola	plastid	90.11	88.17
AT1G06510.1	Thale cress	plastid	77.66	76.53
VIT_12s0028g00200.t01	Wine grape	mitochondrion	51.28	48.78
PGSC0003DMT400054832	Potato	cytosol	45.79	43.1
KRH73638	Soybean	plastid	46.15	43.0
Solyc10g007730.2.1	Tomato	cytosol	45.05	42.41
KRH14485	Soybean	plastid	43.59	40.2
GSMUA_Achr7P17650_001	Banana	plastid	37.36	35.92
Os01t0696000-02	Rice	plastid	34.07	30.59
TraesCS3A01G257600.1	Wheat	plastid	32.6	30.38
TraesCS3B01G290400.1	Wheat	plastid	32.6	30.38
TraesCS3D01G257600.1	Wheat	mitochondrion, plastid	31.87	30.31
HORVU3Hr1G065350.1	Barley	plastid	29.67	28.12
KXG33191	Sorghum	mitochondrion	29.3	25.64
Zm00001d043764_P005	Maize	mitochondrion	32.6	24.32

Protein Annotations

EnsemblPlants:CDY06646	EnsemblPlantsGene:GSBRNA2T00122808001	ncoils:Coil	PANTHER:PTHR37174	ProteinID:CDY06646	ProteinID:CDY06646.1
SEG:seg	UniParc:UPI0004EF156E	MapMan:35.2	:	:	:

Description

BnaA10g04250D

Coordinates

chrLK031972:+:33253..34509

Molecular Weight (calculated)

30512.1 Da

IEP (calculated)

4.956

GRAVY (calculated)

-0.482

Length

273 amino acids

Sequence
(BLAST)

001: MVTTTTSVVG APLVVARSRR IPTTLKCFAS TANSELLRSQ LDRLHAEAES TRAKANSNRL RLLRLSEAAE NLRRQASLHV QTGKENDARE LLLQKKKVMQ
101: ALDKAKARIE LLDTLSSKLN EAISVKETQL IGNISLDLEV DRERTSDGVH IVSPKPESTE EGHENDQTDL GSQESQLIEN NFEEHQETGL EEALTGNIFS
201: EVSSYESFLE NLDQKLCRIE DELVTVVNVA SLVLSHEDKP KNLKVQQTSE ILEEIRCVRE RIASIICKEA NIS

Best Arabidopsis Sequence Match ( AT1G06510.1 )
(BLAST)

001: MVTTTIGGVP VVIAQSRRIP TSLRCFSATA NSDLLRSQLD RLHAEAESTR AKANSNRLRL LRLSEAAENL REQAAVNVRT GKENDARDLL LQKKKVMQAL
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS

Arabidopsis Description

Forkhead-associated domain protein [Source:UniProtKB/TrEMBL;Acc:Q84K72]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.