Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73638 | Soybean | plastid | 87.16 | 88.05 |
| VIT_12s0028g00200.t01 | Wine grape | mitochondrion | 46.62 | 48.08 |
| AT1G06510.1 | Thale cress | plastid | 41.22 | 44.04 |
| Bra015506.1-P | Field mustard | plastid | 40.2 | 43.59 |
| CDY06646 | Canola | plastid | 40.2 | 43.59 |
| PGSC0003DMT400054832 | Potato | cytosol | 41.55 | 42.41 |
| Solyc10g007730.2.1 | Tomato | cytosol | 41.55 | 42.41 |
| CDY10205 | Canola | plastid | 38.51 | 40.86 |
| GSMUA_Achr7P17650_001 | Banana | plastid | 32.77 | 34.15 |
| TraesCS3D01G257600.1 | Wheat | mitochondrion, plastid | 27.7 | 28.57 |
| TraesCS3B01G290400.1 | Wheat | plastid | 27.7 | 27.99 |
| TraesCS3A01G257600.1 | Wheat | plastid | 27.36 | 27.65 |
| Os01t0696000-02 | Rice | plastid | 27.7 | 26.97 |
| KXG33191 | Sorghum | mitochondrion | 28.04 | 26.6 |
| HORVU3Hr1G065350.1 | Barley | plastid | 23.65 | 24.31 |
| Zm00001d043764_P005 | Maize | mitochondrion | 29.05 | 23.5 |
Protein Annotations
| EMBL:ACUP02008504 | EnsemblPlants:KRH14485 | EnsemblPlantsGene:GLYMA_14G028800 | EntrezGene:100790457 | PANTHER:PTHR37174 | ProteinID:KRH14485 |
| ProteinID:KRH14485.1 | SEG:seg | UniParc:UPI000233ACD4 | UniProt:I1M6X9 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr14:-:2092208..2094171
Molecular Weight (calculated)
33129.1 Da
IEP (calculated)
4.739
GRAVY (calculated)
-0.490
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MILNCVRVTA MPMMAVPSWR STCCCASSSS SSSVSTINTD QLRSQLDHLH SEADATRAKA TNARLRFLRL SEVAEKLQKQ AAISIQKGQE NYAREMLFQR
101: KKVLQALDKS KRRIEVLDEL SSKLSEAISL KESQLIGNVT VKIEDTTEDA SSPVRIIAPK EEVQNNVTKD ESDPDTAEFG GDIQDVQLSI ESEGSSLDDK
201: ETQHLLESLS ISTPNEDNIA RNSSEISSYE DFMEYIDLKL SEIEAELVTV LNVSTLVLDN EERAKNSRLQ QTIELLDSIH GIRQRIRNTK EAKVRI
101: KKVLQALDKS KRRIEVLDEL SSKLSEAISL KESQLIGNVT VKIEDTTEDA SSPVRIIAPK EEVQNNVTKD ESDPDTAEFG GDIQDVQLSI ESEGSSLDDK
201: ETQHLLESLS ISTPNEDNIA RNSSEISSYE DFMEYIDLKL SEIEAELVTV LNVSTLVLDN EERAKNSRLQ QTIELLDSIH GIRQRIRNTK EAKVRI
001: MVTTTIGGVP VVIAQSRRIP TSLRCFSATA NSDLLRSQLD RLHAEAESTR AKANSNRLRL LRLSEAAENL REQAAVNVRT GKENDARDLL LQKKKVMQAL
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS
Arabidopsis Description
Forkhead-associated domain protein [Source:UniProtKB/TrEMBL;Acc:Q84K72]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.