Factsheet for Solyc10g007730.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g073920.2.1
Solyc03g083280.2.1
Solyc05g053730.2.1
Solyc05g054960.2.1
Solyc06g008220.2.1
Solyc07g063190.2.1
Solyc10g006970.2.1
Solyc10g079430.1.1
Solyc10g080400.1.1
Solyc12g013810.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06510.1	Solyc05g054960.2.1	AT1G32580.1	21798944
AT1G06510.1	Solyc06g008220.2.1	AT1G32580.1	21798944
AT1G06510.1	Solyc01g073920.2.1	AT2G32840.1	21798944
AT1G06510.1	Solyc10g080400.1.1	AT2G42260.1	21798944
AT1G06510.1	Solyc07g063190.2.1	AT3G15360.1	21798944
AT1G06510.1	Solyc10g006970.2.1	AT3G15360.1	21798944
AT1G06510.1	Solyc12g013810.1.1	AT3G15360.1	21798944
AT1G06510.1	Solyc03g083280.2.1	AT3G49240.1	21798944
AT1G06510.1	Solyc10g079430.1.1	AT3G60360.1	21798944
AT1G06510.1	Solyc05g053730.2.1	AT5G49210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054832	Potato	cytosol	93.45	93.45
VIT_12s0028g00200.t01	Wine grape	mitochondrion	53.1	53.66
Bra015506.1-P	Field mustard	plastid	42.41	45.05
CDY06646	Canola	plastid	42.41	45.05
CDY10205	Canola	plastid	42.41	44.09
AT1G06510.1	Thale cress	plastid	41.72	43.68
KRH73638	Soybean	plastid	43.79	43.34
KRH14485	Soybean	plastid	42.41	41.55
GSMUA_Achr7P17650_001	Banana	plastid	35.86	36.62
Os01t0696000-02	Rice	plastid	31.72	30.26
TraesCS3D01G257600.1	Wheat	mitochondrion, plastid	28.97	29.27
TraesCS3A01G257600.1	Wheat	plastid	28.97	28.67
TraesCS3B01G290400.1	Wheat	plastid	28.62	28.33
KXG33191	Sorghum	mitochondrion	29.31	27.24
HORVU3Hr1G065350.1	Barley	plastid	26.21	26.39
Zm00001d043764_P005	Maize	mitochondrion	28.97	22.95

Protein Annotations

EnsemblPlants:Solyc10g007730.2.1	EnsemblPlantsGene:Solyc10g007730.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	ncoils:Coil	PANTHER:PTHR37174	UniParc:UPI000276B3CC	UniProt:K4CXV2
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:1977115..1980047

Molecular Weight (calculated)

32865.0 Da

IEP (calculated)

5.790

GRAVY (calculated)

-0.610

Length

290 amino acids

Sequence
(BLAST)

001: MILNCAFSGF VQWKIQKKMV NLAASSTNNF NTEKLREQLD HLHKEAQSTR NKANNARSRL LRLSEAAERF RRQAAISVRT GKENDARELL FQKKKIMQAM
101: EKSKSRIELL DELAAKLNEA ISMREKQLIG NVALDLEIAI DETPSPVRIV SPKDDIADNS DENEDVDLET IKLADSQELQ APYDGNADLK TNNELKHLGA
201: STSGDMSKEA DRINSLKGVS SYEEFLEHID QQLRDIEVEL VTFLRFSSLI LENKDKLENS KIQQALDVLN GVHQLRGRIE SIVQKKTGVY

Best Arabidopsis Sequence Match ( AT1G06510.1 )
(BLAST)

001: MVTTTIGGVP VVIAQSRRIP TSLRCFSATA NSDLLRSQLD RLHAEAESTR AKANSNRLRL LRLSEAAENL REQAAVNVRT GKENDARDLL LQKKKVMQAL
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS

Arabidopsis Description

Forkhead-associated domain protein [Source:UniProtKB/TrEMBL;Acc:Q84K72]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.