Factsheet for Zm00001d043764_P005

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002854_P001
Zm00001d004927_P001
Zm00001d012549_P001
Zm00001d017379_P001
Zm00001d026243_P002
Zm00001d038733_P001
Zm00001d041650_P001
Zm00001d044388_P001
Zm00001d045528_P001
Zm00001d047985_P002
Zm00001d050595_P001
Zm00001d051250_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06510.1	Zm00001d026243_P002	AT1G32580.1	21798944
AT1G06510.1	Zm00001d045528_P001	AT1G32580.1	21798944
AT1G06510.1	Zm00001d047985_P002	AT2G32840.1	21798944
AT1G06510.1	Zm00001d002854_P001	AT3G15360.1	21798944
AT1G06510.1	Zm00001d017379_P001	AT3G15360.1	21798944
AT1G06510.1	Zm00001d051250_P001	AT3G15360.1	21798944
AT1G06510.1	Zm00001d038733_P001	AT3G49240.1	21798944
AT1G06510.1	Zm00001d044388_P001	AT3G49240.1	21798944
AT1G06510.1	Zm00001d012549_P001	AT3G60360.1	21798944
AT1G06510.1	Zm00001d041650_P001	AT3G60360.1	21798944
AT1G06510.1	Zm00001d050595_P001	AT3G60360.1	21798944
AT1G06510.1	Zm00001d004927_P001	AT5G49210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33191	Sorghum	mitochondrion	71.04	83.33
Os01t0696000-02	Rice	plastid	48.63	58.55
TraesCS3A01G257600.1	Wheat	plastid	45.36	56.66
TraesCS3D01G257600.1	Wheat	mitochondrion, plastid	43.17	55.05
TraesCS3B01G290400.1	Wheat	plastid	43.99	54.95
HORVU3Hr1G065350.1	Barley	plastid	40.71	51.74
GSMUA_Achr7P17650_001	Banana	plastid	26.78	34.51
Bra015506.1-P	Field mustard	plastid	24.86	33.33
CDY06646	Canola	plastid	24.32	32.6
AT1G06510.1	Thale cress	plastid	24.04	31.77
KRH73638	Soybean	plastid	24.04	30.03
VIT_12s0028g00200.t01	Wine grape	mitochondrion	23.5	29.97
CDY10205	Canola	plastid	22.4	29.39
PGSC0003DMT400054832	Potato	cytosol	23.22	29.31
KRH14485	Soybean	plastid	23.5	29.05
Solyc10g007730.2.1	Tomato	cytosol	22.95	28.97

Protein Annotations

EnsemblPlants:Zm00001d043764_P005	EnsemblPlants:Zm00001d043764_T005	EnsemblPlantsGene:Zm00001d043764	EntrezGene:100274395	ncoils:Coil	ProteinID:ONM38950.1
ProteinID:ONM38951.1	UniParc:UPI000843F342	UniProt:A0A1D6NEP0	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3:-:209274775..209298189

Molecular Weight (calculated)

41306.2 Da

IEP (calculated)

5.216

GRAVY (calculated)

-0.340

Length

366 amino acids

Sequence
(BLAST)

001: MAFAVTLTPL RATAVLAGWR RRPGVTPPRF AVVLATSTGV GGERTPPTFR RLREELLQLH AEADLTQSKA NSERVRLVRL TEAAENLKKR AATSVRMGKE
101: SEAVDLLVQK KKLTKALENI KERIEVLDML SAKISEVNGM VFYLVKSQNW YFGQLLLSIY STVEYSGTYC CEFLFLNLMV YATLNDQFCW IQVISMKQNM
201: LIEYALRPET SNGEDSDDKI RVFSSTVNVG TNGAGSSDSH PKSVEKESFE LRNEAHAIAS MADDAEQSAL QMSDSFSFLN NSDPANYIKN HSAYDDLIEH
301: INLQMKSLEY EIEQFINSQS VEEVGSEKQR SDKWQRLSDI QMLIKETREK IARILGMIVE ETESGT

Best Arabidopsis Sequence Match ( AT1G06510.1 )
(BLAST)

001: MVTTTIGGVP VVIAQSRRIP TSLRCFSATA NSDLLRSQLD RLHAEAESTR AKANSNRLRL LRLSEAAENL REQAAVNVRT GKENDARDLL LQKKKVMQAL
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS

Arabidopsis Description

Forkhead-associated domain protein [Source:UniProtKB/TrEMBL;Acc:Q84K72]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.