Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g007730.2.1 | Tomato | cytosol | 93.45 | 93.45 |
| VIT_12s0028g00200.t01 | Wine grape | mitochondrion | 53.45 | 54.01 |
| Bra015506.1-P | Field mustard | plastid | 43.1 | 45.79 |
| CDY06646 | Canola | plastid | 43.1 | 45.79 |
| CDY10205 | Canola | plastid | 43.1 | 44.8 |
| AT1G06510.1 | Thale cress | plastid | 42.76 | 44.77 |
| KRH73638 | Soybean | plastid | 45.17 | 44.71 |
| KRH14485 | Soybean | plastid | 42.41 | 41.55 |
| GSMUA_Achr7P17650_001 | Banana | plastid | 35.86 | 36.62 |
| Os01t0696000-02 | Rice | plastid | 31.03 | 29.61 |
| TraesCS3D01G257600.1 | Wheat | mitochondrion, plastid | 28.97 | 29.27 |
| TraesCS3A01G257600.1 | Wheat | plastid | 28.97 | 28.67 |
| TraesCS3B01G290400.1 | Wheat | plastid | 28.62 | 28.33 |
| KXG33191 | Sorghum | mitochondrion | 28.97 | 26.92 |
| HORVU3Hr1G065350.1 | Barley | plastid | 26.21 | 26.39 |
| Zm00001d043764_P005 | Maize | mitochondrion | 29.31 | 23.22 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400054832 | EnsemblPlantsGene:PGSC0003DMG400021285 | EntrezGene:102599751 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | ncoils:Coil | PANTHER:PTHR37174 | PGSC:PGSC0003DMG400021285 |
| RefSeq:XP_015170136.1 | SEG:seg | UniParc:UPI00029517E4 | UniProt:M1BWY3 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400021285]
Coordinates
chr10:+:2711413..2715612
Molecular Weight (calculated)
32902.1 Da
IEP (calculated)
5.347
GRAVY (calculated)
-0.648
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MILNSAFSGF VQWKIPKKMV NLAASGTNNL NTEKLREQLD HLHKEAQSTR NKANNARLRL LRLSEAAERF RRQAAISVRT RKENDARELL FQKKKIMQAM
101: EKSKSRIELL DELAAKLNEA ISMREKQLIG NVALDLEIAI DDAPSPVRIV SPKDDNADNS DENEDVDLET IKLDDSQELQ APYDGNADLK TDNELKNLEV
201: STSGNMSKEA DRINSLKGVS SYEEFLEHID QQLRDIEVEL VTFLRFSSLI LENKDKLENS KVQQALDVLE GVHQLRGRIE SIVQKKAGVH
101: EKSKSRIELL DELAAKLNEA ISMREKQLIG NVALDLEIAI DDAPSPVRIV SPKDDNADNS DENEDVDLET IKLDDSQELQ APYDGNADLK TDNELKNLEV
201: STSGNMSKEA DRINSLKGVS SYEEFLEHID QQLRDIEVEL VTFLRFSSLI LENKDKLENS KVQQALDVLE GVHQLRGRIE SIVQKKAGVH
001: MVTTTIGGVP VVIAQSRRIP TSLRCFSATA NSDLLRSQLD RLHAEAESTR AKANSNRLRL LRLSEAAENL REQAAVNVRT GKENDARDLL LQKKKVMQAL
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS
101: DKAKARIELL DTLSSKLNEA ISVKETQLIG NISLDLEEDG ENTSGGIHIV SPKPESTEDG VENDHTHLDS EGIQLIERNV EDYQELLDTN NNVLEDVSIG
201: SILKEVSSYE SFLENLDQKL SRIEAELVTV VNVASLVLNH EDKPKNLKVQ QTAEILEEIR RVRERIANII CKEANIS
Arabidopsis Description
Forkhead-associated domain protein [Source:UniProtKB/TrEMBL;Acc:Q84K72]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.