Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 4
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G32580.1 | PGSC0003DMT400063189 | AT3G48150.1 | 21798944 |
| AT1G32580.1 | PGSC0003DMT400001474 | AT3G49580.1 | 21798944 |
| AT1G32580.1 | PGSC0003DMT400001475 | AT3G49580.1 | 21798944 |
| AT1G32580.1 | PGSC0003DMT400001476 | AT3G49580.1 | 21798944 |
| AT1G32580.1 | PGSC0003DMT400069515 | AT3G49580.1 | 21798944 |
| AT2G35240.1 | PGSC0003DMT400001474 | AT3G49580.1 | 21798944 |
| AT2G35240.1 | PGSC0003DMT400001475 | AT3G49580.1 | 21798944 |
| AT2G35240.1 | PGSC0003DMT400001476 | AT3G49580.1 | 21798944 |
| AT2G35240.1 | PGSC0003DMT400069515 | AT3G49580.1 | 21798944 |
| AT2G35240.1 | PGSC0003DMT400016521 | AT4G14740.1 | 21798944 |
| AT2G35240.1 | PGSC0003DMT400008772 | AT4G39050.1 | 21798944 |
| AT2G35240.1 | PGSC0003DMT400015465 | AT5G13810.1 | 21798944 |
| AT2G35240.1 | PGSC0003DMT400047487 | AT5G13810.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g054960.2.1 | Tomato | plastid | 97.86 | 97.86 |
| Os06t0116600-01 | Rice | mitochondrion | 58.55 | 83.03 |
| GSMUA_Achr6P01260_001 | Banana | cytosol | 52.14 | 82.99 |
| GSMUA_Achr4P27580_001 | Banana | cytosol | 51.28 | 81.63 |
| HORVU0Hr1G032330.2 | Barley | cytosol | 36.32 | 77.98 |
| CDX79529 | Canola | cytosol | 39.74 | 76.86 |
| CDY37719 | Canola | plastid | 63.25 | 66.67 |
| Zm00001d026243_P002 | Maize | extracellular | 61.54 | 66.36 |
| Bra021852.1-P | Field mustard | plastid | 62.82 | 66.22 |
| EES11377 | Sorghum | mitochondrion, plastid | 61.11 | 66.2 |
| TraesCS2D01G434600.1 | Wheat | plastid | 60.68 | 66.05 |
| Zm00001d045528_P001 | Maize | mitochondrion | 62.82 | 65.92 |
| TraesCS2A01G437600.1 | Wheat | plastid | 60.26 | 65.89 |
| EER87743 | Sorghum | mitochondrion | 62.39 | 65.77 |
| VIT_07s0005g03930.t01 | Wine grape | mitochondrion, plastid | 66.24 | 65.68 |
| TraesCS2B01G457700.1 | Wheat | plastid | 59.83 | 65.42 |
| CDY23734 | Canola | plastid | 63.25 | 64.91 |
| CDY19491 | Canola | plastid | 63.25 | 64.07 |
| Bra005495.1-P | Field mustard | plastid | 62.82 | 63.91 |
| CDY17174 | Canola | plastid | 62.82 | 63.91 |
| TraesCS4A01G437100.1 | Wheat | mitochondrion | 64.1 | 63.83 |
| PGSC0003DMT400038117 | Potato | plastid | 62.82 | 63.64 |
| TraesCS7D01G045100.1 | Wheat | mitochondrion, plastid | 62.82 | 63.36 |
| TraesCS7A01G050200.1 | Wheat | mitochondrion | 63.25 | 62.71 |
| HORVU7Hr1G008880.2 | Barley | plastid | 63.68 | 62.08 |
| AT1G32580.1 | Thale cress | mitochondrion, plastid | 59.4 | 60.7 |
| AT2G35240.1 | Thale cress | mitochondrion, plastid | 59.83 | 60.34 |
| TraesCS6D01G007100.1 | Wheat | mitochondrion | 60.68 | 58.92 |
| TraesCS6B01G010000.1 | Wheat | plastid | 62.82 | 58.57 |
| TraesCS6A01G005300.1 | Wheat | plastid | 61.54 | 57.6 |
| HORVU6Hr1G002030.1 | Barley | plastid | 61.97 | 56.42 |
| GSMUA_Achr2P17930_001 | Banana | mitochondrion, plastid | 62.39 | 56.37 |
| HORVU5Hr1G072150.9 | Barley | mitochondrion | 41.03 | 55.81 |
| HORVU1Hr1G057120.1 | Barley | plastid | 31.2 | 47.71 |
| TraesCS3A01G476100.2 | Wheat | plastid | 35.04 | 46.07 |
| HORVU2Hr1G040170.17 | Barley | mitochondrion | 40.17 | 34.43 |
| PGSC0003DMT400043314 | Potato | mitochondrion, plastid | 35.47 | 31.92 |
| PGSC0003DMT400055883 | Potato | plastid | 30.77 | 31.86 |
| PGSC0003DMT400054809 | Potato | mitochondrion | 35.04 | 19.95 |
| PGSC0003DMT400039805 | Potato | plastid | 34.19 | 19.85 |
| PGSC0003DMT400057561 | Potato | mitochondrion, plastid | 32.05 | 15.96 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400060429 | EnsemblPlantsGene:PGSC0003DMG400023502 | EntrezGene:102592321 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF9 | PGSC:PGSC0003DMG400023502 | RefSeq:XP_006345901.1 |
| SEG:seg | UniParc:UPI0002960E78 | UniProt:M1C5U3 | MapMan:16.12.5.1 | : | : |
Description
DAG protein, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400023502]
Coordinates
chr5:+:50666357..50669897
Molecular Weight (calculated)
26378.4 Da
IEP (calculated)
9.061
GRAVY (calculated)
-0.655
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKITKSIS RTLYTYRLSP RFLSSASSPS ITQPPPLPAV GSSPQPSFLL SHSLLPTNPN GLKPFSLNTV RFRVNRSGSS PYTPGTGDRA PTEMAPLFPG
101: CDYEHWLIVM DKPGGEGAHK QQMIDCYVQT LAKVLGSEEE AKKKIYNVSC ERYFGFGCEV DEETANKMEG LPGVLFVLPD SYVDPEYKDY GAELFVNGEI
201: VQRSPERQRR VEPVPQRNDR IRPNRYNRRR DNMR
101: CDYEHWLIVM DKPGGEGAHK QQMIDCYVQT LAKVLGSEEE AKKKIYNVSC ERYFGFGCEV DEETANKMEG LPGVLFVLPD SYVDPEYKDY GAELFVNGEI
201: VQRSPERQRR VEPVPQRNDR IRPNRYNRRR DNMR
001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
Arabidopsis Description
MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.