Factsheet for PGSC0003DMT400055883

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g079770.2.1	Tomato	plastid	97.79	97.79
CDX97960	Canola	cytosol	56.64	83.12
GSMUA_Achr8P33150_001	Banana	cytosol	50.44	82.01
CDY20996	Canola	cytosol	55.31	81.7
CDY37239	Canola	cytosol	39.38	67.94
KRH10700	Soybean	nucleus, plastid	66.37	67.57
VIT_19s0014g04710.t01	Wine grape	plastid	68.14	67.25
KRH21628	Soybean	nucleus, plastid	66.37	66.67
Bra016835.1-P	Field mustard	plastid	67.26	65.52
AT1G11430.1	Thale cress	plastid	65.93	64.22
CDY49781	Canola	plastid	67.7	63.75
EES14516	Sorghum	plastid	63.27	63.56
Zm00001d024674_P001	Maize	plastid	61.95	62.78
Os08t0139100-01	Rice	plastid	63.27	62.45
TraesCS7A01G307000.1	Wheat	plastid	61.95	61.67
TraesCS7B01G207300.1	Wheat	plastid	61.5	60.96
TraesCS7D01G303900.1	Wheat	plastid	61.06	60.53
CDY57037	Canola	mitochondrion	65.93	57.53
Bra019853.1-P	Field mustard	plastid	67.26	56.51
HORVU7Hr1G073170.2	Barley	plastid	62.39	55.73
PGSC0003DMT400043314	Potato	mitochondrion, plastid	36.28	31.54
PGSC0003DMT400060429	Potato	plastid	31.86	30.77
PGSC0003DMT400038117	Potato	plastid	30.97	30.3
PGSC0003DMT400057561	Potato	mitochondrion, plastid	44.25	21.28
PGSC0003DMT400039805	Potato	plastid	34.96	19.6
PGSC0003DMT400054809	Potato	mitochondrion	34.96	19.22

Protein Annotations

EnsemblPlants:PGSC0003DMT400055883	EnsemblPlantsGene:PGSC0003DMG400021708	EntrezGene:102597199	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF3	PGSC:PGSC0003DMG400021708	RefSeq:XP_006365865.1
UniParc:UPI000294F9E5	UniProt:M1BYQ1	MapMan:16.12.5.1	:	:	:

Description

DAG protein, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400021708]

Coordinates

chr2:+:35522939..35524966

Molecular Weight (calculated)

25396.0 Da

IEP (calculated)

8.709

GRAVY (calculated)

-0.638

Length

226 amino acids

Sequence
(BLAST)

001: MAALNLPSFS KTLNPNSQFQ NLPKTPTFLL SLSYPFLTTS LSSIPPAKNS RFPVVRAISD GEYSSKRSSN SDERETIMLP GCDYNHWLIV MEFPKDPAPT
101: REQMIDTYLD TLATVLGSME EAKKNMYAFS TTTYTGFQCT VSEETSEKFK GLPGVLWVLP DSYIDVKNKD YGGDKYINGE IIPCQYPTYQ PKQANRTRSK
201: SKAYVRRRDG PPPERTRQAA APESSS

Best Arabidopsis Sequence Match ( AT1G11430.1 )
(BLAST)

001: MASFTTTSSS SLLLKTLLPV SHLNRFSTLS GIRVGDSWTP LLRNISTAGS RRRVAIVKAA TVDSDYSSKR SNSNEQRETI MLPGCDYNHW LIVMEFPKDP
101: APSRDQMIDT YLNTLATVLG SMEEAKKNMY AFSTTTYTGF QCTIDEETSE KFKGLPGVLW VLPDSYIDVK NKDYGGDKYI NGEIIPCTYP TYQPKQRNNT
201: KYQSKRYERK RDGPPPPEQR KPRQEPAASD SS

Arabidopsis Description

MORF9Multiple organellar RNA editing factor 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LPZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.