Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20996 | Canola | cytosol | 94.81 | 95.42 |
| GSMUA_Achr8P33150_001 | Banana | cytosol | 75.97 | 84.17 |
| CDY37239 | Canola | cytosol | 69.48 | 81.68 |
| CDY49781 | Canola | plastid | 99.35 | 63.75 |
| AT1G11430.1 | Thale cress | plastid | 94.16 | 62.5 |
| Zm00001d024674_P001 | Maize | plastid | 86.36 | 59.64 |
| EES14516 | Sorghum | plastid | 87.01 | 59.56 |
| KRH10700 | Soybean | nucleus, plastid | 84.42 | 58.56 |
| TraesCS7A01G307000.1 | Wheat | plastid | 85.71 | 58.15 |
| VIT_19s0014g04710.t01 | Wine grape | plastid | 86.36 | 58.08 |
| TraesCS7B01G207300.1 | Wheat | plastid | 85.71 | 57.89 |
| KRH21628 | Soybean | nucleus, plastid | 84.42 | 57.78 |
| TraesCS7D01G303900.1 | Wheat | plastid | 85.06 | 57.46 |
| Bra019853.1-P | Field mustard | plastid | 100.0 | 57.25 |
| Os08t0139100-01 | Rice | plastid | 85.06 | 57.21 |
| PGSC0003DMT400055883 | Potato | plastid | 83.12 | 56.64 |
| Solyc02g079770.2.1 | Tomato | plastid | 82.47 | 56.19 |
| CDY57037 | Canola | mitochondrion | 94.16 | 55.98 |
| HORVU7Hr1G073170.2 | Barley | plastid | 85.06 | 51.78 |
| CDX74079 | Canola | cytosol | 40.26 | 42.18 |
| CDY34929 | Canola | cytosol | 37.01 | 40.71 |
| CDX79529 | Canola | cytosol | 31.82 | 40.5 |
| CDY58181 | Canola | cytosol | 37.66 | 34.52 |
| CDY08033 | Canola | mitochondrion | 46.1 | 33.02 |
| CDY37719 | Canola | plastid | 41.56 | 28.83 |
| CDY23734 | Canola | plastid | 41.56 | 28.07 |
| CDY17174 | Canola | plastid | 41.56 | 27.83 |
| CDY19491 | Canola | plastid | 41.56 | 27.71 |
| CDX84224 | Canola | mitochondrion, plastid | 40.26 | 26.96 |
| CDY65831 | Canola | mitochondrion, plastid | 38.96 | 26.91 |
| CDY31675 | Canola | plastid | 40.26 | 26.5 |
| CDX79597 | Canola | plastid | 37.66 | 24.89 |
| CDX72924 | Canola | mitochondrion | 28.57 | 24.04 |
| CDX96416 | Canola | mitochondrion | 29.22 | 23.68 |
| CDX68262 | Canola | mitochondrion | 28.57 | 23.16 |
| CDY65020 | Canola | mitochondrion | 28.57 | 23.16 |
| CDX98651 | Canola | mitochondrion | 43.51 | 20.74 |
| CDY50054 | Canola | mitochondrion | 48.7 | 19.74 |
| CDY01629 | Canola | mitochondrion | 50.0 | 19.59 |
| CDX78969 | Canola | mitochondrion | 48.7 | 19.58 |
| CDY20096 | Canola | plastid | 34.42 | 16.88 |
| CDX97626 | Canola | plastid | 38.31 | 16.21 |
| CDX84615 | Canola | mitochondrion | 18.83 | 16.2 |
| CDX98522 | Canola | plastid | 38.31 | 15.9 |
| CDX82454 | Canola | mitochondrion, plastid | 38.96 | 15.42 |
| CDX75801 | Canola | mitochondrion, plastid | 39.61 | 15.29 |
| CDY32326 | Canola | cytosol | 32.47 | 14.16 |
| CDY60655 | Canola | plastid | 44.81 | 9.56 |
Protein Annotations
| EnsemblPlants:CDX97960 | EnsemblPlantsGene:GSBRNA2T00105313001 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF3 | ProteinID:CDX97960 | ProteinID:CDX97960.1 |
| SEG:seg | UniParc:UPI0004EDBD1D | MapMan:16.12.5.1 | : | : | : |
Description
BnaA06g07110D
Coordinates
chrLK031902:+:249385..251165
Molecular Weight (calculated)
17625.8 Da
IEP (calculated)
8.002
GRAVY (calculated)
-0.944
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPGCDYNHW LIVMEFPKDP APTREQMIDT YLNTLATVLG SMEEAKKNMY AFSTTTYTGF QCTIDEETSE KFKGLPGVLW VLPDSYIDVK NKDYGGDKYI
101: NGEIIPCTYP TYQPKQRNNS KYQSKRYERK RDGPPPPEQQ RKPRQAPPPA SGSS
101: NGEIIPCTYP TYQPKQRNNS KYQSKRYERK RDGPPPPEQQ RKPRQAPPPA SGSS
001: MASFTTTSSS SLLLKTLLPV SHLNRFSTLS GIRVGDSWTP LLRNISTAGS RRRVAIVKAA TVDSDYSSKR SNSNEQRETI MLPGCDYNHW LIVMEFPKDP
101: APSRDQMIDT YLNTLATVLG SMEEAKKNMY AFSTTTYTGF QCTIDEETSE KFKGLPGVLW VLPDSYIDVK NKDYGGDKYI NGEIIPCTYP TYQPKQRNNT
201: KYQSKRYERK RDGPPPPEQR KPRQEPAASD SS
101: APSRDQMIDT YLNTLATVLG SMEEAKKNMY AFSTTTYTGF QCTIDEETSE KFKGLPGVLW VLPDSYIDVK NKDYGGDKYI NGEIIPCTYP TYQPKQRNNT
201: KYQSKRYERK RDGPPPPEQR KPRQEPAASD SS
Arabidopsis Description
MORF9Multiple organellar RNA editing factor 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LPZ1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.