Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P27580_001 | Banana | cytosol | 68.45 | 78.23 |
| GSMUA_Achr6P01260_001 | Banana | cytosol | 67.26 | 76.87 |
| CDX79529 | Canola | cytosol | 51.79 | 71.9 |
| Os06t0116600-01 | Rice | mitochondrion | 70.24 | 71.52 |
| HORVU0Hr1G032330.2 | Barley | cytosol | 45.83 | 70.64 |
| Bra036402.1-P | Field mustard | mitochondrion, plastid | 93.45 | 70.4 |
| CDY65831 | Canola | mitochondrion, plastid | 93.45 | 70.4 |
| CDX84224 | Canola | mitochondrion, plastid | 88.69 | 64.78 |
| CDY31675 | Canola | plastid | 88.1 | 63.25 |
| AT2G35240.1 | Thale cress | mitochondrion, plastid | 85.71 | 62.07 |
| VIT_05s0049g01500.t01 | Wine grape | plastid | 78.57 | 56.65 |
| TraesCS2D01G434600.1 | Wheat | plastid | 72.02 | 56.28 |
| TraesCS2B01G457700.1 | Wheat | plastid | 71.43 | 56.07 |
| CDY37719 | Canola | plastid | 73.81 | 55.86 |
| TraesCS2A01G437600.1 | Wheat | plastid | 70.83 | 55.61 |
| EES11377 | Sorghum | mitochondrion, plastid | 71.43 | 55.56 |
| EER87743 | Sorghum | mitochondrion | 73.21 | 55.41 |
| Zm00001d026243_P002 | Maize | extracellular | 71.43 | 55.3 |
| CDY23734 | Canola | plastid | 74.4 | 54.82 |
| Zm00001d045528_P001 | Maize | mitochondrion | 72.62 | 54.71 |
| CDY17174 | Canola | plastid | 73.81 | 53.91 |
| CDY19491 | Canola | plastid | 73.81 | 53.68 |
| TraesCS7D01G045100.1 | Wheat | mitochondrion, plastid | 73.21 | 53.02 |
| TraesCS7A01G050200.1 | Wheat | mitochondrion | 73.81 | 52.54 |
| TraesCS4A01G437100.1 | Wheat | mitochondrion | 73.21 | 52.34 |
| HORVU5Hr1G072150.9 | Barley | mitochondrion | 52.98 | 51.74 |
| HORVU7Hr1G008880.2 | Barley | plastid | 73.21 | 51.25 |
| TraesCS6D01G007100.1 | Wheat | mitochondrion | 73.21 | 51.04 |
| TraesCS6A01G005300.1 | Wheat | plastid | 74.4 | 50.0 |
| TraesCS6B01G010000.1 | Wheat | plastid | 74.4 | 49.8 |
| CDX79597 | Canola | plastid | 67.86 | 48.93 |
| GSMUA_Achr2P17930_001 | Banana | mitochondrion, plastid | 74.4 | 48.26 |
| HORVU6Hr1G002030.1 | Barley | plastid | 73.81 | 48.25 |
| HORVU1Hr1G057120.1 | Barley | plastid | 36.31 | 39.87 |
| CDX84615 | Canola | mitochondrion | 41.07 | 38.55 |
| CDX97960 | Canola | cytosol | 34.52 | 37.66 |
| TraesCS3A01G476100.2 | Wheat | plastid | 39.88 | 37.64 |
| CDX74079 | Canola | cytosol | 32.74 | 37.41 |
| CDY20996 | Canola | cytosol | 33.93 | 37.25 |
| CDY34929 | Canola | cytosol | 30.36 | 36.43 |
| HORVU2Hr1G040170.17 | Barley | mitochondrion | 52.38 | 32.23 |
| CDY08033 | Canola | mitochondrion | 41.07 | 32.09 |
| CDY37239 | Canola | cytosol | 22.62 | 29.01 |
| CDX72924 | Canola | mitochondrion | 30.95 | 28.42 |
| CDX96416 | Canola | mitochondrion | 30.95 | 27.37 |
| CDX68262 | Canola | mitochondrion | 29.76 | 26.32 |
| CDY65020 | Canola | mitochondrion | 28.57 | 25.26 |
| CDY49781 | Canola | plastid | 35.71 | 25.0 |
| CDY57037 | Canola | mitochondrion | 34.52 | 22.39 |
| CDY20096 | Canola | plastid | 41.67 | 22.29 |
| CDX97626 | Canola | plastid | 43.45 | 20.05 |
| CDX98522 | Canola | plastid | 43.45 | 19.68 |
| CDX98651 | Canola | mitochondrion | 35.71 | 18.58 |
| CDX82454 | Canola | mitochondrion, plastid | 42.26 | 18.25 |
| CDX75801 | Canola | mitochondrion, plastid | 42.26 | 17.79 |
| CDY50054 | Canola | mitochondrion | 36.9 | 16.32 |
| CDX78969 | Canola | mitochondrion | 36.9 | 16.19 |
| CDY01629 | Canola | mitochondrion | 36.31 | 15.52 |
| CDY32326 | Canola | cytosol | 31.55 | 15.01 |
| CDY60655 | Canola | plastid | 29.76 | 6.93 |
Protein Annotations
| EnsemblPlants:CDY58181 | EnsemblPlantsGene:GSBRNA2T00023194001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF9 | ProteinID:CDY58181 | ProteinID:CDY58181.1 | SEG:seg |
| UniParc:UPI0004EF091A | UniProt:A0A078J5H7 | MapMan:16.12.5.1 | : | : | : |
Description
BnaCnng32800DBnaCnng32800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5H7]
Coordinates
chrLK033643:+:20735..21533
Molecular Weight (calculated)
19326.9 Da
IEP (calculated)
6.127
GRAVY (calculated)
-0.793
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSGGGSYS PVKSNLSDRQ PTEMAPLFSG CDYEHWLIVM DKPGGENASP QQMIDCYVQT LAKIVGCEEE AKRKIYNVSC ERYFGFGCEI DEETSKGIPG
101: VLFVLPDSYV DPEYKDYGAE LFVNGEVVPR PPERHRRMME LTTHRSSDKP KYHDKTRYVR RRENMRSL
101: VLFVLPDSYV DPEYKDYGAE LFVNGEVVPR PPERHRRMME LTTHRSSDKP KYHDKTRYVR RRENMRSL
001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
Arabidopsis Description
MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.