CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01629	Canola	mitochondrion	94.12	77.35
Bra012522.1-P	Field mustard	mitochondrion, plastid	92.88	77.32
CDY50054	Canola	mitochondrion	78.33	66.58
CDX78969	Canola	mitochondrion	78.02	65.8
AT4G20020.1	Thale cress	mitochondrion	73.68	56.8
CDY20996	Canola	cytosol	20.74	43.79
CDX97960	Canola	cytosol	20.74	43.51
CDX79529	Canola	cytosol	13.93	37.19
VIT_12s0035g00240.t01	Wine grape	mitochondrion	45.82	36.72
CDY34929	Canola	cytosol	15.79	36.43
CDX74079	Canola	cytosol	16.41	36.05
CDY37239	Canola	cytosol	14.55	35.88
CDY58181	Canola	cytosol	18.58	35.71
CDY08033	Canola	mitochondrion	21.98	33.02
CDY49781	Canola	plastid	24.15	32.5
CDY65831	Canola	mitochondrion, plastid	21.67	31.39
CDY37719	Canola	plastid	21.36	31.08
CDY17174	Canola	plastid	21.98	30.87
CDY19491	Canola	plastid	21.67	30.3
CDY23734	Canola	plastid	21.05	29.82
CDY57037	Canola	mitochondrion	23.53	29.34
GSMUA_Achr1P22060_001	Banana	mitochondrion	35.29	29.23
KRH26355	Soybean	mitochondrion	41.49	29.0
Os11t0216400-01	Rice	mitochondrion	33.44	28.88
KRH44085	Soybean	mitochondrion, plastid	41.18	28.79
CDX79597	Canola	plastid	20.74	28.76
CDY31675	Canola	plastid	20.74	28.63
Zm00001d049043_P001	Maize	mitochondrion	35.91	28.29
CDX84224	Canola	mitochondrion, plastid	20.12	28.26
TraesCS4D01G104800.2	Wheat	mitochondrion	36.22	28.12
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	37.15	27.91
TraesCS4A01G203900.1	Wheat	nucleus	35.6	27.78
TraesCS4B01G107700.2	Wheat	mitochondrion	36.22	27.02
CDX72924	Canola	mitochondrion	14.55	25.68
EES08356	Sorghum	mitochondrion	35.6	25.67
Solyc02g079210.2.1	Tomato	plastid	35.91	25.22
CDX84615	Canola	mitochondrion	13.93	25.14
PGSC0003DMT400057561	Potato	mitochondrion, plastid	36.53	25.11
CDX96416	Canola	mitochondrion	14.55	24.74
CDY65020	Canola	mitochondrion	13.93	23.68
CDX68262	Canola	mitochondrion	13.62	23.16
CDY20096	Canola	plastid	21.05	21.66
CDY60655	Canola	plastid	47.68	21.33
CDX97626	Canola	plastid	23.22	20.6
CDX98522	Canola	plastid	23.22	20.22
CDX82454	Canola	mitochondrion, plastid	24.15	20.05
CDX75801	Canola	mitochondrion, plastid	23.84	19.3
CDY32326	Canola	cytosol	18.89	17.28

Protein Annotations

EnsemblPlants:CDX98651	EnsemblPlantsGene:GSBRNA2T00106704001	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	ProteinID:CDX98651	ProteinID:CDX98651.1
SEG:seg	UniParc:UPI0004EEAC3C	MapMan:16.12.5.1	:	:	:

Description

BnaA03g44360D

Coordinates

chrLK031906:-:453328..455177

Molecular Weight (calculated)

35620.7 Da

IEP (calculated)

5.814

GRAVY (calculated)

-0.705

Length

323 amino acids

Sequence
(BLAST)

001: MAMISHRLRR VLLTATSSLN RAISLSPSSV APTADSPLVQ RSVLARLTEV TTTRAPVRLF STRQYKLYKE GDEITEDTVL FEGCDFNHWL ITMDFPKDNP
101: LSPEEMVSAY EQTCAAGLGI SLEEAKTKMY ACSTTTYQGF QAIMTEQESE KFKDLPGVVF VLPDSYIDPV NKAYGGDKYE NGVITHRPPP IQANRRTRDR
201: FNQRSDRQGG PQNFQRNPNY GQQPPMQGGG GGYGGGPQQS YGPPGQGTQA PPPPFQGGYN QGPPRSPPPP YQAELNQTIP QADQRNAAGD WNNNNPVGQT
301: GQIFSVSTWE KILDRDMMLA AVE

Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.