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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 2
  • mitochondrion 6
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
mitochondrion: 19010998
mitochondrion: 23027867
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d049043_P001 Maize mitochondrion 76.74 70.0
TraesCS4D01G104800.2 Wheat mitochondrion 74.33 66.83
TraesCS4A01G203900.1 Wheat nucleus 72.19 65.22
HORVU4Hr1G016440.1 Barley mitochondrion, plastid 74.33 64.65
EES08356 Sorghum mitochondrion 76.47 63.84
TraesCS4B01G107700.2 Wheat mitochondrion 73.8 63.74
GSMUA_Achr1P22060_001 Banana mitochondrion 49.73 47.69
Os08t0139100-01 Rice plastid 25.4 41.48
Os06t0116600-01 Rice mitochondrion 17.91 40.61
VIT_12s0035g00240.t01 Wine grape mitochondrion 43.32 40.2
Bra013439.1-P Field mustard mitochondrion 34.76 33.77
CDX78969 Canola mitochondrion 34.49 33.68
CDX98651 Canola mitochondrion 28.88 33.44
CDY50054 Canola mitochondrion 33.69 33.16
Os03t0581600-01 Rice mitochondrion 20.05 32.89
Bra012522.1-P Field mustard mitochondrion, plastid 33.96 32.73
CDY01629 Canola mitochondrion 33.42 31.81
AT4G20020.1 Thale cress mitochondrion 33.42 29.83
Solyc02g079210.2.1 Tomato plastid 36.63 29.78
PGSC0003DMT400057561 Potato mitochondrion, plastid 37.17 29.57
KRH26355 Soybean mitochondrion 35.29 28.57
KRH44085 Soybean mitochondrion, plastid 35.29 28.57
Os09t0509000-01 Rice plastid 24.06 22.73
Os09t0132600-01 Rice mitochondrion 23.26 21.86
AT5G44780.1 Thale cress mitochondrion 34.22 17.7
CDY60655 Canola plastid 32.62 16.9
Bra025105.1-P Field mustard mitochondrion 31.82 16.23
Protein Annotations
EnsemblPlants:Os11t0216400-01EnsemblPlantsGene:Os11g0216400EntrezGene:4350082GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016554PANTHER:PTHR31346PANTHER:PTHR31346:SF5ProteinID:ABA92063.1ProteinID:BAF27873.1
ProteinID:BAT13222.1ProteinID:EAZ17829.1RefSeq:XP_015615260.1SEG:segUniParc:UPI000068241DUniProt:Q2R8U1
MapMan:16.12.5.1:::::
Description
Peptidase S8, subtilisin-related domain containing protein. (Os11t0216400-01)
Coordinates
chr11:-:6088031..6091472
Molecular Weight (calculated)
40710.6 Da
IEP (calculated)
9.056
GRAVY (calculated)
-1.021
Length
374 amino acids
Sequence
(BLAST)
001: MALALRLRRA LAAASTSASP FLRPAASASR SAPLAAAPLP PPHQVSRPWL PAAGFRSSAA ASAAARGDDY GRRDVDEKIS PDEILFEGCD YNHWLITMEF
101: PDPKPTREEM IETYLQTLAK VVGSYEEAKK RMYAFSTTTY VGFQAVMTEE MSEKFRGLPG VVFILPDSYL YPETKEYGGD KYENGVITPR PPPVHYSKPS
201: RTDRNRNYRG NYQNGPPQGN YQNSPPPYGS QQDGRGYAPR QNYADRPGYS GTSGGYQSQT TQYQGHANPA GQGQGYYNSQ ERRNFNQGQG GDFRPGGPSA
301: PGTYGQPPAP GNYAQPHPPT YPGSNQGAPG VNPGYGGNNR QGPGPAYGGD NWQGGSNQYP SQSEGQQESW RGRQ
Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)
001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY
Arabidopsis Description
MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.