Factsheet for Bra012522.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98651	Canola	mitochondrion	77.32	92.88
CDY01629	Canola	mitochondrion	94.07	92.88
Bra013439.1-P	Field mustard	mitochondrion	79.12	79.74
AT4G20020.1	Thale cress	mitochondrion	74.74	69.21
VIT_12s0035g00240.t01	Wine grape	mitochondrion	43.3	41.69
Bra017613.1-P	Field mustard	plastid	7.22	41.18
Bra001218.1-P	Field mustard	cytosol	14.43	39.72
Bra016835.1-P	Field mustard	plastid	22.42	37.5
Os11t0216400-01	Rice	mitochondrion	32.73	33.96
GSMUA_Achr1P22060_001	Banana	mitochondrion	33.51	33.33
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	36.6	33.02
TraesCS4D01G104800.2	Wheat	mitochondrion	35.31	32.93
Zm00001d049043_P001	Maize	mitochondrion	34.79	32.93
KRH44085	Soybean	mitochondrion, plastid	38.92	32.68
TraesCS4A01G203900.1	Wheat	nucleus	34.79	32.61
KRH26355	Soybean	mitochondrion	38.66	32.47
Bra017328.1-P	Field mustard	cytosol	15.46	32.26
Bra019853.1-P	Field mustard	plastid	22.16	31.97
TraesCS4B01G107700.2	Wheat	mitochondrion	35.31	31.64
Bra040292.1-P	Field mustard	mitochondrion, plastid	20.1	31.58
Bra021852.1-P	Field mustard	plastid	17.53	30.63
Bra005495.1-P	Field mustard	plastid	18.04	30.43
Bra036402.1-P	Field mustard	mitochondrion, plastid	17.27	30.04
EES08356	Sorghum	mitochondrion	34.54	29.91
PGSC0003DMT400057561	Potato	mitochondrion, plastid	36.08	29.79
Solyc02g079210.2.1	Tomato	plastid	34.79	29.35
Bra005357.1-P	Field mustard	plastid	17.01	28.21
Bra016051.1-P	Field mustard	mitochondrion	11.86	25.14
Bra021584.1-P	Field mustard	plastid	21.39	24.92
Bra023005.1-P	Field mustard	endoplasmic reticulum	5.93	24.73
Bra025105.1-P	Field mustard	mitochondrion	45.88	24.28
Bra003876.1-P	Field mustard	mitochondrion	11.86	24.21
Bra001578.1-P	Field mustard	plastid	22.94	23.99
Bra027285.1-P	Field mustard	plastid	23.97	23.13

Protein Annotations

EnsemblPlants:Bra012522.1	EnsemblPlants:Bra012522.1-P	EnsemblPlantsGene:Bra012522	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	SEG:seg	UniParc:UPI000254044E
UniProt:M4D7R2	MapMan:16.12.5.1	:	:	:	:

Description

AT4G20020 (E=5e-081) | unknown protein

Coordinates

chrA03:-:23824354..23826372

Molecular Weight (calculated)

41628.4 Da

IEP (calculated)

7.419

GRAVY (calculated)

-0.809

Length

388 amino acids

Sequence
(BLAST)

001: MAMISHRLRR ALLTASSSLN RSVSISTSSV SPTADSPLVQ RSVLARLTEV TTTRAPVRLF STRQYKLYKE GDEITEDTVL FEGCDFNHWL ITMDFPKDNP
101: LSPEEMVSTY EQTCAAGLGI SLEEAKKKMY ACSTTTYQGF QAIMTEQESE KFKDLPGVVF VLPDSYIDPV NKAYGGDKYE NGVITHRPPP IQANRRTRDR
201: FNQRSDRQGG PQNFQRNPNY GQQPPMQGGG GGYGGGPPGQ GTQAPPPPFQ GGYNQGPPRS PPPPYQAGYN QGQGSPVPPF QGPPGGYGQG GPGNYSQGPQ
301: GGYNQGGPMN GNYGPAPGAR NPNLGYGQGY AGPGQEVNQT IPQAGQRNAA GDWNNNNPVG QQGSDQSIFS VATGEKILDR GMMPAAVE

Best Arabidopsis Sequence Match ( AT4G20020.1 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQV
401: RSRSIMNLAS FFFDILIRH

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.