Factsheet for Bra001218.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74079	Canola	cytosol	94.33	90.48
Bra040292.1-P	Field mustard	mitochondrion, plastid	91.49	52.23
CDY08033	Canola	mitochondrion	75.18	49.3
AT3G06790.2	Thale cress	mitochondrion	80.14	46.31
Os03t0581600-01	Rice	mitochondrion	68.79	42.54
VIT_05s0077g01880.t01	Wine grape	mitochondrion	77.31	41.92
GSMUA_Achr11P...	Banana	mitochondrion	74.47	41.5
KRH50805	Soybean	mitochondrion	73.05	41.37
KRH02286	Soybean	mitochondrion	71.63	40.89
EES12861	Sorghum	mitochondrion	70.21	40.57
GSMUA_Achr8P22480_001	Banana	mitochondrion	74.47	40.54
Solyc01g066060.2.1	Tomato	plastid	74.47	40.54
PGSC0003DMT400043314	Potato	mitochondrion, plastid	74.47	40.38
Zm00001d026307_P001	Maize	mitochondrion	70.21	40.24
TraesCS6A01G314700.1	Wheat	mitochondrion	71.63	40.08
TraesCS6D01G294000.1	Wheat	mitochondrion	71.63	40.08
TraesCS6B01G344700.2	Wheat	mitochondrion	71.63	39.92
Bra017613.1-P	Field mustard	plastid	18.44	38.24
HORVU6Hr1G077460.3	Barley	plastid	70.21	37.36
Bra023005.1-P	Field mustard	endoplasmic reticulum	19.86	30.11
Bra017328.1-P	Field mustard	cytosol	38.3	29.03
Bra016835.1-P	Field mustard	plastid	41.84	25.43
Bra021852.1-P	Field mustard	plastid	39.72	25.23
Bra005495.1-P	Field mustard	plastid	39.72	24.35
Bra036402.1-P	Field mustard	mitochondrion, plastid	37.59	23.77
Bra005357.1-P	Field mustard	plastid	38.3	23.08
Bra016051.1-P	Field mustard	mitochondrion	28.37	21.86
Bra019853.1-P	Field mustard	plastid	41.13	21.56
Bra003876.1-P	Field mustard	mitochondrion	28.37	21.05
Bra021584.1-P	Field mustard	plastid	43.97	18.62
Bra001578.1-P	Field mustard	plastid	46.1	17.52
Bra027285.1-P	Field mustard	plastid	48.94	17.16
Bra013439.1-P	Field mustard	mitochondrion	41.13	15.06
Bra012522.1-P	Field mustard	mitochondrion, plastid	39.72	14.43
Bra025105.1-P	Field mustard	mitochondrion	34.75	6.68

Protein Annotations

EnsemblPlants:Bra001218.1	EnsemblPlants:Bra001218.1-P	EnsemblPlantsGene:Bra001218	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF1	SEG:seg	UniParc:UPI00025403FC
UniProt:M4CAI9	MapMan:16.12.5.1	:	:	:	:

Description

AT3G06790 (E=5e-051) | plastid developmental protein DAG, putative

Coordinates

chrA03:-:15391829..15392575

Molecular Weight (calculated)

16443.2 Da

IEP (calculated)

7.345

GRAVY (calculated)

-1.177

Length

141 amino acids

Sequence
(BLAST)

001: MEFNDPKPTE DEMINAYVKT EEEAKKKIYS VSTSTYTGFG ALISEELSCK VKGLPGVLWV LPDSYLDVPN KDYGGDLYIE GKVIPRPQYR FTEQRQIRNR
101: SRPRYDRRRE TMQVERREPT QQNNWNQNQP PSSTGHQAPD N

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.